DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment net and ube2e2

DIOPT Version :9

Sequence 1:NP_001259789.1 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001119983.1 Gene:ube2e2 / 100144938 XenbaseID:XB-GENE-5800934 Length:201 Species:Xenopus tropicalis


Alignment Length:98 Identity:23/98 - (23%)
Similarity:36/98 - (36%) Gaps:26/98 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DSPNSNDRDAGFCSASSESEGGDDLVVEHARSGSPDIRPKGTD-SADSKPIALVRN--KRKSSEP 86
            |||:::       ..||:.:..|.:..|..|.   .::||..: ...||..|.:..  ||...|.
 Frog    10 DSPSTS-------GGSSDGDQRDGVQNEQDRE---KVQPKKKEGKISSKTAAKLSTSAKRIQKEL 64

  Fly    87 FKVVGLTTPNSKSMP-------------GPPSS 106
            .::.....||..:.|             |||.|
 Frog    65 AEITLDPPPNCSAGPKGDNIYEWRSTILGPPGS 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_001259789.1 HLH 269..320 CDD:278439
ube2e2NP_001119983.1 UQ_con 59..196 CDD:365926 9/39 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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