DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and tcf21

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001103518.1 Gene:tcf21 / 100126209 XenbaseID:XB-GENE-484805 Length:179 Species:Xenopus tropicalis


Alignment Length:235 Identity:48/235 - (20%)
Similarity:67/235 - (28%) Gaps:104/235 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 RGPRPDW-----DPDVVAALDEDFDFNNPDNQLEDNFMELAMQPGAGGDEDDDGEDWFDEEGGEH 213
            |.|:|.|     .|..:|.|    .|.:..::|.:.|:| .:.|..|                  
 Frog    43 RAPQPAWRFGLFKPGEIAPL----LFRDVSSELAEFFLE-EVTPAQG------------------ 84

  Fly   214 EFDSDEMEGDYSDTEERDGLGPLDDRYGREETKSRFTEYSMSSSVIRRNEQLTLLDDRFEKFFEQ 278
                    |.|.....|...||              ..:|..|.|      |.||      ..|:
 Frog    85 --------GSYRCCYRRPDWGP--------------GVWSQPSDV------LELL------VTEE 115

  Fly   279 YDDPEV----GPLDCEEIEGHVDPNDDVLLRCAAEFKRERDAVYDAEYEKQWIRERLTQLQDDNS 339
            ...|.:    ||:        |.|..:|.||||...:.....:|                     
 Frog   116 LPRPSLVALPGPV--------VGPGANVSLRCAGRLRNMSFVLY--------------------- 151

  Fly   340 EEEEVA--MQVEDGEQKKWDCESIL-----STYSNIYNHP 372
             .|.||  :|.....| .|...::|     .|||..|:.|
 Frog   152 -REGVAAPLQYRHSAQ-PWADFTLLGARAPGTYSCYYHTP 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 15/70 (21%)
tcf21NP_001103518.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..87 14/74 (19%)
bHLH_TS_TCF21_capsulin 77..140 CDD:381547 23/123 (19%)

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