DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and neurod4

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001124513.1 Gene:neurod4 / 100124310 XenbaseID:XB-GENE-972704 Length:316 Species:Xenopus tropicalis


Alignment Length:127 Identity:44/127 - (34%)
Similarity:67/127 - (52%) Gaps:24/127 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 ERTQKESTSSSFLEASLS-----------DEDLNKTGLAPISRPHQHQRNYKNMT-------RER 269
            ||.|::|...  :.:.||           |::..:.|    .:|.:.....|.||       |.|
 Frog    22 ERNQRQSAYD--IISGLSHEERCSIDGEDDDEEEEDG----EKPKKRGPKKKKMTKARLERFRVR 80

  Fly   270 RIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSAD 331
            |::||||||||:|.::.|.|.||:.:|.|:.||||||:..||:|.:||..||.:..:..|.:
 Frog    81 RVKANARERTRMHGLNDALENLRRVMPCYSKTQKLSKIETLRLARNYIWALSDILEQGQSTE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 34/73 (47%)
neurod4NP_001124513.1 bHLH_TS_NeuroD4_ATOH3 <69..137 CDD:381564 33/67 (49%)
Neuro_bHLH 138..256 CDD:463621 1/5 (20%)

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