DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and neurod1

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001090868.1 Gene:neurod1 / 100038290 XenbaseID:XB-GENE-963757 Length:361 Species:Xenopus tropicalis


Alignment Length:132 Identity:46/132 - (34%)
Similarity:65/132 - (49%) Gaps:27/132 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 DEDLNKTGLAPISRPHQHQRNYKNMTRE-------RRIEANARERTRVHTISAAYETLRQAVPAY 298
            |||.:.      .:|.:.....|.||:.       ||::||||||.|:|.::||.:.||:.||.|
 Frog    80 DEDDDD------QKPKRRGPKKKKMTKARVERFKVRRMKANARERNRMHGLNAALDNLRKVVPCY 138

  Fly   299 ASTQKLSKLSVLRVACSYILTLSRMAGEDYSAD-----------QSVPS---IATCLEAVTSTIQ 349
            :.||||||:..||:|.:||..||.:.....|.|           .|.|:   :|.||:....|..
 Frog   139 SKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPRTFL 203

  Fly   350 TE 351
            .|
 Frog   204 PE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 33/73 (45%)
neurod1NP_001090868.1 bHLH_TS_NeuroD1 82..167 CDD:381562 35/90 (39%)
Neuro_bHLH 167..289 CDD:463621 9/39 (23%)

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