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Protein Alignment net and olig1
DIOPT Version :9
Sequence 1: | NP_001259789.1 |
Gene: | net / 45339 |
FlyBaseID: | FBgn0002931 |
Length: | 360 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001018632.1 |
Gene: | olig1 / 100001484 |
ZFINID: | ZDB-GENE-050107-2 |
Length: | 235 |
Species: | Danio rerio |
Alignment Length: | 102 |
Identity: | 27/102 - (26%) |
Similarity: | 47/102 - (46%) |
Gaps: | 30/102 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 253 SRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAYAST---------------- 301
|:|.:...:.:.....|:| |:|||.|:..::.|.:.||:.:..|:|:
Zfish 47 SKPPRELSSEEQQELRRKI--NSRERKRMQDLNVAMDALREVMVPYSSSPTGVGGALQHPYFPPG 109
Fly 302 -----QKLSKLSVLRVACSYILTLS-------RMAGE 326
::|||:|.|.:|.:|||.|. |:.||
Zfish 110 APTTGRRLSKISTLVLARNYILLLGSSLQEMRRLLGE 146
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
net | NP_001259789.1 |
HLH |
269..320 |
CDD:278439 |
21/71 (30%) |
olig1 | NP_001018632.1 |
HLH domain |
62..139 |
|
22/78 (28%) |
HLH |
62..133 |
CDD:278439 |
21/72 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3898 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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