DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and olig1

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001018632.1 Gene:olig1 / 100001484 ZFINID:ZDB-GENE-050107-2 Length:235 Species:Danio rerio


Alignment Length:102 Identity:27/102 - (26%)
Similarity:47/102 - (46%) Gaps:30/102 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 SRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAYAST---------------- 301
            |:|.:...:.:.....|:|  |:|||.|:..::.|.:.||:.:..|:|:                
Zfish    47 SKPPRELSSEEQQELRRKI--NSRERKRMQDLNVAMDALREVMVPYSSSPTGVGGALQHPYFPPG 109

  Fly   302 -----QKLSKLSVLRVACSYILTLS-------RMAGE 326
                 ::|||:|.|.:|.:|||.|.       |:.||
Zfish   110 APTTGRRLSKISTLVLARNYILLLGSSLQEMRRLLGE 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 25/93 (27%)
olig1NP_001018632.1 bHLH_SF 56..144 CDD:469605 23/89 (26%)
HLH domain 62..139 22/78 (28%)

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