DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment na and CACNA1C

DIOPT Version :9

Sequence 1:NP_001096981.2 Gene:na / 45338 FlyBaseID:FBgn0002917 Length:2233 Species:Drosophila melanogaster
Sequence 2:XP_016875415.1 Gene:CACNA1C / 775 HGNCID:1390 Length:2412 Species:Homo sapiens


Alignment Length:2327 Identity:488/2327 - (20%)
Similarity:842/2327 - (36%) Gaps:785/2327 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 FNPSPGSSP--GNGLGLGARQDAASALNSPTTIVNSGSGSGGGSSVAFGMQPQQQQQSLAGGGGG 235
            |..|||.||  .:.:...:...:......||...|.||             |:....::......
Human    41 FYISPGESPVRTSSVQTPSHPTSTEPCGPPTLCSNYGS-------------PRPAHANMNANAAA 92

  Fly   236 GSSATAAPSSGGGHNNGAGLGPVVGGGGGGLNLLGGLGGMGGMGGGAAAAGMGICGGISST---- 296
            |.:....|:.|...:..|.:     .......|:|             :||......:|||    
Human    93 GLAPEHIPTPGAALSWQAAI-----DAARQAKLMG-------------SAGNATISTVSSTQRKR 139

  Fly   297 --------VGSAAITGVPPIGLGIATGIGNKIMLGRKQ--SLKGGEPF--------------LAD 337
                    .||...|. ||..| :...:.|.|   |:.  |:...:||              ||.
Human   140 QQYGKPKKQGSTTATR-PPRAL-LCLTLKNPI---RRACISIVEWKPFEIIILLTIFANCVALAI 199

  Fly   338 YGP---EESLNESADIEWVNKLWVRRLMRLCALVSLTSVSLNTPKTFERYPSLQFITFASDTAVT 399
            |.|   ::|...::::|.|..|::                                         
Human   200 YIPFPEDDSNATNSNLERVEYLFL----------------------------------------- 223

  Fly   400 LLFTAEMIAKMHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIILQIFE-VLEIVPKFSYLSIM- 462
            ::||.|...|:...|:|.....||::.|...|       :|.:::.:|. :||...|....:.: 
Human   224 IIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLD-------FIIVVVGLFSAILEQATKADGANALG 281

  Fly   463 --------RAPRPLIMIRFLRVFLKFSMPKSRI--NQIFKRSSQQIYNVTLFFLFFMSLYGLLGV 517
                    :|.|...::|.||  |...:|..::  |.|.| :...:.::.|..||.:.:|.::|:
Human   282 GKGAGFDVKALRAFRVLRPLR--LVSGVPSLQVVLNSIIK-AMVPLLHIALLVLFVIIIYAIIGL 343

  Fly   518 Q-FFGELKNHCVMNNTEYDLYKRPILTINSLAIPD-------TFCSMDPDSGYQCSPGMVCMKMD 574
            : |.|::...|                .|...|.|       :.|:::...|.||..|.||..  
Human   344 ELFMGKMHKTC----------------YNQEGIADVPAEDDPSPCALETGHGRQCQNGTVCKP-- 390

  Fly   575 FLSSYVIGFNG-------FEDIATSIFTVYQAASQEGWVFIMYRAIDS----LPAWRAAFYFSTM 628
                   |::|       |::.|.::.||:|..:.|||..::|...|:    || |   .||.::
Human   391 -------GWDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELP-W---VYFVSL 444

  Fly   629 IFFLAWLVKNVFIAVITETFNEIRVQFQQMWGARGHIQK------------------TAASQI-- 673
            :.|.::.|.|:.:.|::..|::.|.:.:    |||..||                  |.|..|  
Human   445 VIFGSFFVLNLVLGVLSGEFSKEREKAK----ARGDFQKLREKQQLEEDLKGYLDWITQAEDIDP 505

  Fly   674 -----------------------------------------------------------LSGNDT 679
                                                                       :.|.:.
Human   506 ENEDEGMDEEKPRNRGTPAGMLDQKKGKFAWFSHSTETHVSMPTSETESVNTENVAGGDIEGENC 570

  Fly   680 G------------------WRLVTIDD------------------------------NKHGGLAP 696
            |                  |.:.|::.                              .:......
Human   571 GARLAKGSRSAVEPAVLLPWGVTTVNSPWPLEELQTEALSQTSPSHRISKSKFSRYWRRWNRFCR 635

  Fly   697 ETCHAILRSPYFRMLVMSVILANGIVTATMTFKHDGRPRDVFYERYYYIELVFT------CLLDL 755
            ..|.|.::|..|..||:.::..|   |.|:..:|..:|.       :..|:..|      .|...
Human   636 RKCRAAVKSNVFYWLVIFLVFLN---TLTIASEHYNQPN-------WLTEVQDTANKALLALFTA 690

  Fly   756 ETLFKIYCLGWRGYYKHSIHKFELLLAAGTTLHIV----PMFYPSGLTYFQVLRVVRLIKAS--- 813
            |.|.|:|.||.:.|:....::|:..:..|..|..:    .:..|.|::..:.:|::|:.|.:   
Human   691 EMLLKMYSLGLQAYFVSLFNRFDCFVVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYW 755

  Fly   814 PMLEGFVYKIFGPGKKLGSLIIFTMCLLIISSSISMQLFCFLCDF-------TKFESFPEAFMSM 871
            ..|...|..:....:.:.||::.....:||.|.:.||||....:|       :.|::||::.:::
Human   756 NSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTV 820

  Fly   872 FQILTQEAWVEVMDETMIRTSKTLTP--LVAVYFILYHLFVTLIVLSLFVAVILDNL-------- 926
            |||||.|.|..||.:.::.......|  ||.:|||:..:....|:|::|:|:.:|||        
Human   821 FQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTS 885

  Fly   927 --ELDEDIKKLKQLKFREQSAEIKETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESFMKH 989
              :.:|:.|:.|:|. |..|.|.|:.|      .||                   |.|.||  |.
Human   886 AQKEEEEEKERKKLA-RTASPEKKQEL------VEK-------------------PAVGES--KE 922

  Fly   990 FVIELETEDSLVENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSS--LRKLAITHIINDS 1052
            ..|||::                                    :.|.|.|  ..|:.:..:..:.
Human   923 EKIELKS------------------------------------ITADGESPPATKINMDDLQPNE 951

  Fly  1053 NNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKKFGSRSIRRSVRSGSIKLKQTYEH 1117
            |.      |.:..|...|.|                                           |.
Human   952 NE------DKSPYPNPETTG-------------------------------------------EE 967

  Fly  1118 LMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLRENHPFFDTPLFLVPRESR 1182
            ..|..::...||                  .|..:|:...::...:.|...|     |:....:|
Human   968 DEEEPEMPVGPR------------------PRPLSELHLKEKAVPMPEASAF-----FIFSSNNR 1009

  Fly  1183 FRKICQKIVHARYDARLKDPLTGKERKVQYKSLHNFLGLVTYLDWVMIFATTLSCISMMFETPNY 1247
            ||..|.:||:        |.:              |..|:       :|...||.||:..|.|  
Human  1010 FRLQCHRIVN--------DTI--------------FTNLI-------LFFILLSSISLAAEDP-- 1043

  Fly  1248 RVMDHPTLQ--IAEYGFVIF---MSLELALKILADGLFFTPKAYIKDVAAALDVFIYVVSTSFLC 1307
              :.|.:.:  |..|..::|   .::|:|||:.|.|.|....::.::....||  :.|||.|.:.
Human  1044 --VQHTSFRNHILFYFDIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILD--LLVVSVSLIS 1104

  Fly  1308 W----MPLNIPTNSAAQLLMILRCVRPLRIFTL---VPHMRKVVYELCRGFKEILLVSTLLILLM 1365
            :    ..:|:     .::|.:||.:||||....   :.|:.:.|:...|....|::|:|   ||.
Human  1105 FGIQSSAINV-----VKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTT---LLQ 1161

  Fly  1366 FIFASYGVQLYGGRLARCNDPTISRREDCVGVFMRRVFVTKMKLTPGPDESYPAMLVPRVWANPR 1430
            |:||..||||:.|:|..|:|.:.....:|.|.:          :|....|....::.||.|.| .
Human  1162 FMFACIGVQLFKGKLYTCSDSSKQTEAECKGNY----------ITYKDGEVDHPIIQPRSWEN-S 1215

  Fly  1431 RFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAV-------GPVH------AVYIHIYIFLGCMI 1482
            :|:|||:..||:.||.|.:|:||   .::|.:::       ||::      :::..|||.:....
Human  1216 KFDFDNVLAAMMALFTVSTFEGW---PELLYRSIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFF 1277

  Fly  1483 GLTLFVGVVIANYSENKGTALLTVDQRRWCDLKKR--------LKIAQPL--HLPPRPDGRKIRA 1537
            .:.:|||.||..:.| :|.     .:.:.|:|.|.        || |:||  ::|......|:  
Human  1278 MMNIFVGFVIVTFQE-QGE-----QEYKNCELDKNQRQCVEYALK-ARPLRRYIPKNQHQYKV-- 1333

  Fly  1538 FTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVHTERLV--IVSAVLTFVFVVEVVMKNIAFT 1600
              :.:.....|:.::.|::|:|::.|::... |:....::.  |::.:.|.:|.||:::|.|||.
Human  1334 --WYVVNSTYFEYLMFVLILLNTICLAMQHY-GQSCLFKIAMNILNMLFTGLFTVEMILKLIAFK 1395

  Fly  1601 PRGYWQSRRNRYDLLVTVAGVIWIILQTILRNDLSYFF-------------GFMV---------- 1642
            |:||:....|.:|.|:.:..:|.:||     ::.:::|             |.:|          
Human  1396 PKGYFSDPWNVFDFLIVIGSIIDVIL-----SETNHYFCDAWNTFDALIVVGSIVDIAITEVNPA 1455

  Fly  1643 ----------------VILRFFTITGKHTTLKMLMLTVGV-----SVCKSF----FIIFGMFLLV 1682
                            :.:.||.:......:|:|....|:     :..|||    ::...:.:|.
Human  1456 EHTQCSPSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLF 1520

  Fly  1683 FFYALAGTILFGTVKYGE--GIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCM--------VQ 1737
            |.||:.|..:||.:...:  .|.|..||.:....|.:|||..|||.|..||..||        .:
Human  1521 FIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESE 1585

  Fly  1738 PPYCTLGNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYADI 1802
            |...|.|    ||.||: :.::.||.:||::..::::||.||:||:||.  |...:.::|....:
Human  1586 PSNSTEG----ETPCGS-SFAVFYFISFYMLCAFLIINLFVAVIMDNFD--YLTRDWSILGPHHL 1643

  Fly  1803 RNFQNTWNIVDIHQRG-------VIPVRRVKFIL---RLLKGRLECDPQKDRLLFKYMCYELDKL 1857
            ..|:..|...|...:|       |..:||::..|   :|...|:.|    .||:...|     .|
Human  1644 DEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVAC----KRLVSMNM-----PL 1699

  Fly  1858 HNGEDVTFHDVINMLSYRSVDI-------------------RKALQLEELLAREEFEYLV----- 1898
            ::...|.|:..:..|...::.|                   |.|..||:  |.||...::     
Human  1700 NSDGTVMFNATLFALVRTALRIKTEEGPSPSEAHQGAEDPFRPAGNLEQ--ANEELRAIIKKIWK 1762

  Fly  1899 -----------------EEEVAKMTIRTWLEGCLKKIRAQNAS------KQQN--SLIAGLRATN 1938
                             |..|.|......::...:|.:.:...      .|:|  ||.||||..:
Human  1763 RTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQAGLRTLH 1827

  Fly  1939 E-QPVMRPNIQEDKAPLGAVDKSAISTISGAV-------AGAC---------PPTSDAFSPTFSS 1986
            : .|.:|..|..|......:||:....:|.|.       ||..         .....||..||::
Human  1828 DIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSAFPQTFTT 1892

  Fly  1987 TE--NEEKDGSSSAVVQLPHSE---------TSIAGTGSSA---TGAATATG-----------TS 2026
            ..  :..|.|||....:.|..|         :|.:.|||:|   ....||.|           .|
Human  1893 QRPLHINKAGSSQGDTESPSHEKLVDSTFTPSSYSSTGSNANINNANNTALGRLPRPAGYPSTVS 1957

  Fly  2027 SGLGVGPPTVQSTARHVMTVGKRGYALNRSDSTGSSAGRKF---LAPTSSDP 2075
            :..|.|||.  |.|..|..|..: .:.||........|..|   |.|..:.|
Human  1958 TVEGHGPPL--SPAIRVQEVAWK-LSSNRMHCCDMLDGGTFPPALGPRRAPP 2006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
naNP_001096981.2 Ion_trans 373..654 CDD:278921 66/311 (21%)
Ion_trans 734..927 CDD:278921 56/224 (25%)
Ion_trans 1240..1497 CDD:278921 77/281 (27%)
Ion_trans 1571..1793 CDD:278921 72/281 (26%)
CACNA1CXP_016875415.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172471at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R175
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.950

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