DRSC/TRiP Functional Genomics Resources

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Protein Alignment na and Catsper3

DIOPT Version :10

Sequence 1:NP_001096981.2 Gene:na / 45338 FlyBaseID:FBgn0002917 Length:2233 Species:Drosophila melanogaster
Sequence 2:NP_001239416.1 Gene:Catsper3 / 76856 MGIID:1924106 Length:395 Species:Mus musculus


Alignment Length:457 Identity:101/457 - (22%)
Similarity:167/457 - (36%) Gaps:153/457 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1223 TYLDWVMIFATTLSCISMMFETPNYRVMDH--PTLQIAEYGFVIFMSLELALKILADGLFFTPKA 1285
            |:...|||...|.:...::..| ||.:...  .|.:::|..||.....|..:|:..|     |..
Mouse    50 TFFQIVMITTVTTNSFLLVLGT-NYDIQFEFFRTFEVSELFFVSVYVCEFLMKVYVD-----PIT 108

  Fly  1286 YIKDVAAALDVFIYVVSTSFLCWMPLNIPTNSAA--------QLLMILRCVRPLR-IFTLVPHMR 1341
            |.||....|||.|.::.|  :.::...|..|.:|        |.|.||:.:...| |.||:..:.
Mouse   109 YWKDGYNILDVIILIILT--IPYLLRKIKGNHSAYLHFADGIQSLRILKLISYSRGIRTLIIAVG 171

  Fly  1342 KVVYELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPTISRREDCVGVFMRRVFVTK 1406
            :.||       .:..|.|||.||||:||..|..|:|          ::.|.|..           
Mouse   172 ETVY-------TVASVLTLLFLLMFVFAILGFCLFG----------VTDRGDLE----------- 208

  Fly  1407 MKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAVGPVHAVY 1471
                                      |:.|:..|..|||.:.:..||.|:::.|.|....|...:
Mouse   209 --------------------------NWGNLASAFFTLFSLATVDGWTDLQEELDKRKFTVSRAF 247

  Fly  1472 IHIYIFLGCMIGLTLFVGVVIANYSENKGTALLTVDQRRWCDLKKRLKIAQPLHLPPRPDGRKIR 1536
            ..::|.|...|.|.:||||:|.:..::               :||                    
Mouse   248 TILFILLASFIFLNMFVGVMIMHTEDS---------------MKK-------------------- 277

  Fly  1537 AFTYDIT----------QHIIFKRVIAVV-VLINSM----LLSITWIKGEV----HTERLVI--V 1580
             |..|:|          :.||.||....| .|:|:.    :..|..::|..    ||:.:|:  .
Mouse   278 -FERDLTLERNLAIMEEKQIILKRQQEEVNRLMNTQKSGSMNFIDMVEGFKKTLRHTDPMVLDDF 341

  Fly  1581 SAVLTFVFVVEVVMKNIAFTPRGYWQSRRNRYDLLVT--------VAGVIWIILQTILRNDLSYF 1637
            |..|:|:.:..|.:.|               .|::|:        :..|:.::|:.:.:...|..
Mouse   342 STSLSFIDIYLVTLDN---------------QDVIVSKLQELYCEIVNVLSLMLEDMPKESSSSL 391

  Fly  1638 FG 1639
            .|
Mouse   392 SG 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
naNP_001096981.2 Ion_trans 361..654 CDD:459842
Ion_trans 705..927 CDD:459842
Ion_trans 1224..1497 CDD:459842 72/283 (25%)
Ion_trans 1545..1793 CDD:459842 23/114 (20%)
Catsper3NP_001239416.1 Ion_trans 49..269 CDD:459842 72/280 (26%)
Blue background indicates that the domain is not in the aligned region.

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