Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335317.1 | Gene: | cacna1ab / 569528 | ZFINID: | ZDB-GENE-090514-3 | Length: | 2336 | Species: | Danio rerio |
Alignment Length: | 2338 | Identity: | 496/2338 - (21%) |
---|---|---|---|
Similarity: | 854/2338 - (36%) | Gaps: | 605/2338 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 260 GGGGGGLNLLGGLGGMGGMGGGAAAAGMGICGGISSTVGSAAITGVPPIGLGIATGIGNKIMLGR 324
Fly 325 KQSLKGGEPFLADYGPEESLNESADIEWVNKLWVRRLMRLCALVSLTS---VSLNTPKTFERYPS 386
Fly 387 LQ--FITFASDTAVTLLFTAEMIAKMHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEV 449
Fly 450 LEIVPKFSYLSIMRAPRPLIM---IRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSL 511
Fly 512 YGLLGVQFF-GELKNHCVMNNTEYDLYKRPILTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDF 575
Fly 576 LSSYVIGFNGFEDIATSIFTVYQAASQEGWVFIMYRAIDSL-PAWRAAFYFSTMI---FFLAWLV 636
Fly 637 KNVFIAVITE---------TFNEIRVQFQQMWGARGHIQKTA-ASQIL---SGNDTG-WRLVTID 687
Fly 688 DNKHGGLAPE-------------------------------------TCHAILRSPYFRMLVMSV 715
Fly 716 ILANGIVTATMTFKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELL 780
Fly 781 LAAGTTLHIV-PMFYPS---GLTYFQVLRVVRLIKAS---PMLEGFVYKIFGPGKKLGSLIIFTM 838
Fly 839 CLLIISSSISMQLFCFLCDF------TKFESFPEAFMSMFQILTQEAWVEVM----------DET 887
Fly 888 MIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVILDNLELDEDIKKLKQ-----------LKFR 941
Fly 942 EQSAEIKETLPFRLRIFEKFPDS---------PQMTILHRIPNDFMLPKVRESFMKHFVIELETE 997
Fly 998 DSLVENCKRPMSECWESNVVFRKQKPVRI--------------MNKTAKVRAAGSSLRKLAIT-- 1046
Fly 1047 ---------------HIINDSNNQRLMLGDSA----MLPVVG----------------------- 1069
Fly 1070 -----------TKGG----GGLKSQGTITHSKPWRVD----------QKKFGSRSIRRSVRSGSI 1109
Fly 1110 KLKQTYEHLMENGDIAAAPRANSGRARPHDLDIKLLQA--KRQQAEMRRNQREEDLRENHPFFDT 1172
Fly 1173 PLFLVPRESRFRKICQKIVHARYD---------ARLK-------DPLTGKERKVQ---------- 1211
Fly 1212 ------------------YKSLHNFLGLVTYLDWVMIFATTLSCISMMFETPNYRVMD-HPTLQI 1257
Fly 1258 AEYGFVIFMSLELALKILADGLFFTPKAYIKDVAAALDVFIYVVSTSFLCWMPLNIPTNSA---- 1318
Fly 1319 ---AQLLMILRCVRPLRIFTLVPHMRKVVYELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRL 1380
Fly 1381 ARCNDPTISRREDCVG---VFMRRVFVTKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAML 1442
Fly 1443 TLFEVLSFKGWLDVR----DVLIKAVGP----------VHAVYIHIYIFLGCMIGLTLFVGVVIA 1493
Fly 1494 NYSENKGTAL----LTVDQRRWCDLKKRLKIAQPL--HLPPRPDGRKIRAFTYDITQHII---FK 1549
Fly 1550 RVIAVVVLINSMLLSITWI-KGEVHTERLVIVSAVLTFVFVVEVVMKNIAFTPRGYWQSRRNRYD 1613
Fly 1614 LLVTVAGVIWIILQTILRNDLSYFFGFMVVILRFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGM 1678
Fly 1679 FLLVFFYALAGTILFGTVKYGE--GIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYC 1741
Fly 1742 ---TLGNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYADIR 1803
Fly 1804 NFQNTWNIVDIHQRGVIPVRRVKFILRLLKGRL----ECDPQK---DRLLFKYMCYELD-KLHNG 1860
Fly 1861 EDVTFHDVINMLSYRSVDIRKA------------LQLEEL-----LAREEFEYLVEEE------- 1901
Fly 1902 -----VAKMTIRTWLEGCLKKIRAQNASKQQNSL----------------IAGLRATNEQPV--M 1943
Fly 1944 RPNIQEDKAPLGAVDKSAISTISGAVAGAC------------------------PPTSD--AFSP 1982
Fly 1983 T---FSSTENEEKDGSSSAVVQLPHSETSIAGTGSSATGA--ATATGTSSGLGVGPPTVQSTARH 2042
Fly 2043 VMTVGKRG-----YALNRSDSTGSSAGRKFLAPTSSDPQQRSTLSDKERLHITSQQRKK------ 2096
Fly 2097 ----NSMTTLPHAGQLGQLAKQRGGGGEATKSSSFFAQLNSEIGQFHYPTINAAAAAAALHGYGH 2157
Fly 2158 GHGHGHGGHGGHGGHGEHQMHHH----------------HGGALGSPSAMMSQMIGGSGKLLP 2204 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 69/299 (23%) |
Ion_trans | 734..927 | CDD:278921 | 63/215 (29%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 72/281 (26%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 59/226 (26%) | ||
cacna1ab | XP_021335317.1 | Ion_trans | 91..360 | CDD:306908 | 72/317 (23%) |
Ion_trans | 465..703 | CDD:306908 | 70/250 (28%) | ||
Ion_trans | 1099..1335 | CDD:306908 | 67/253 (26%) | ||
Ion_trans | 1425..1672 | CDD:306908 | 63/255 (25%) | ||
GPHH | 1673..1743 | CDD:318993 | 15/76 (20%) | ||
Ca_chan_IQ | 1745..1820 | CDD:312334 | 11/74 (15%) | ||
Herpes_ICP4_C | 1841..>2243 | CDD:332854 | 62/351 (18%) | ||
PAT1 | <2144..2300 | CDD:330585 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |