Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001038588.1 | Gene: | scn5lab / 566868 | ZFINID: | ZDB-GENE-060908-3 | Length: | 1954 | Species: | Danio rerio |
Alignment Length: | 2029 | Identity: | 400/2029 - (19%) |
---|---|---|---|
Similarity: | 729/2029 - (35%) | Gaps: | 625/2029 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 361 LMRLCA-LVSLTSVSLNTPKTFERYPSLQFITFASDTAVTLLFTAEMIAKMHIRGVLHGEVPYLK 424
Fly 425 DHWCQFDASMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRPLIMIRFLRVFLKFSMPKSRINQ 489
Fly 490 IFKRSSQQIYNVTLFFLFFMSLYGLLGVQ-FFGELKNHCVMN-----NTEYDLYKRPILTINSLA 548
Fly 549 ---------IPDTF-----------CSMDPDSGYQCSPGMVCMKMDFLSSYVIGFNGFEDIATSI 593
Fly 594 FTVYQAASQEGWVFIMYRAIDSLPAWRAAFYFSTMIFFL-AWLVKNVFIAVITETF--------- 648
Fly 649 ------NEIRVQFQQM------------------------------------------------- 658
Fly 659 ----------------------------------------------------------------- 658
Fly 659 ---WGARGHIQKTAA-------SQIL--SGNDTGWRLVTIDDN---KHGGLAPET---------- 698
Fly 699 ---------------------------------------------------CH------------ 700
Fly 701 ---------------AILRSPYFRMLVMSVILANGIVTATMTFKHDGRPRDVFYERYYYI-ELVF 749
Fly 750 TCLLDLETLFKIYCLGWRGYYKHSIHKFELLLAAGTTLHIVPMFYPSGLTY---FQVLRVVRLIK 811
Fly 812 ASPMLEGFVYKIFGPG-KKLGSLIIFTMCLLIISSSISMQLF------CFLCDFTK--------F 861
Fly 862 ESFPEAFMSMFQILTQEAWVEVMDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVIL--- 923
Fly 924 --DNLELDEDIKKLKQLKFREQSAEIKETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESF 986
Fly 987 MKHFVIELETEDSLVENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSSLRKLAITHIIND 1051
Fly 1052 SNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKKFGSRSIRRSVRSGSIKL---KQ 1113
Fly 1114 TYEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLRENHPFFDTPLFLVP 1178
Fly 1179 RESRFRKICQKIVHAR-YDARLKDPLTGKE----RKVQYKSLHNFLGLVTYLDWVMIFATTLSCI 1238
Fly 1239 SMMFET--PNYRVMDHPTLQIAEYGFVIFMSLELALKILADGLFFTPKAYIKDVAAALDVFIYVV 1301
Fly 1302 STSFLCWMPLNIPTNSAAQLLMILRCVRPLRIFTLVPHMRKVVYELCRGFKEILLVSTLLILLMF 1366
Fly 1367 IFASYGVQLYGGRLARC--------NDPTISRREDCVGVFMRRVFVTKMKLTPGPDESYPAMLVP 1423
Fly 1424 RVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLI--KAV--GPV--HAVYIHIY----IFL 1478
Fly 1479 GCMIGLTLFVGVVIANYSENK-----GTALLTVDQRRWCDLKKRL---KIAQPLHLPPRPDGRKI 1535
Fly 1536 RAFTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVHTERLV-IVSAVLTFVFVVEVVMKNIAF 1599
Fly 1600 TPRGY-----WQSRRNRYDLLVTVAGVIWIILQTILRNDLSYFFG---FMVVIL----RFFTITG 1652
Fly 1653 KHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFYALAGTILFGTVKYGEGIGRRANFGSPVTGVAM 1717
Fly 1718 LFRIVTGEDWNKIMHDCMVQPP-YCT-----LGNNYWETDCGNFTASLIYFCTFYVIITYIVLNL 1776
Fly 1777 LVAIIMENFSLFYSNEEDALLSYADIRNFQNTWNIVDIHQRGVI--------------PVR---- 1823
Fly 1824 -RVKFI---LRLLKG-RLEC------------------DPQKDRLLFKYMCYELDKLHNGEDVTF 1865
Fly 1866 HDVINML--------------SYRSVDIRKALQLEELLAREEFEYLVEEEVAKMTIRTWLEGCLK 1916
Fly 1917 KIRAQNASKQQNSLIAGLRATNEQPVMRPNIQEDKAPLGAVDKSAISTISGAVAGACPPTSD--- 1978
Fly 1979 -AFSPTFSSTENEE 1991 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 65/322 (20%) |
Ion_trans | 734..927 | CDD:278921 | 60/216 (28%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 76/276 (28%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 63/240 (26%) | ||
scn5lab | NP_001038588.1 | Ion_trans | 154..427 | CDD:278921 | 63/300 (21%) |
Na_trans_cytopl | 478..566 | CDD:288761 | 1/87 (1%) | ||
Ion_trans | 723..918 | CDD:278921 | 53/203 (26%) | ||
Na_trans_assoc | 944..1143 | CDD:284034 | 38/288 (13%) | ||
Ion_trans | 1165..1419 | CDD:278921 | 77/280 (28%) | ||
Na_channel_gate | 1411..1463 | CDD:240441 | 12/55 (22%) | ||
Ion_trans | 1485..1723 | CDD:278921 | 63/248 (25%) | ||
GPHH | 1735..1790 | CDD:293510 | 10/54 (19%) | ||
IQ | 1841..1863 | CDD:197470 | 5/21 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |