Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031751845.1 | Gene: | scn8a / 549640 | XenbaseID: | XB-GENE-1011299 | Length: | 1987 | Species: | Xenopus tropicalis |
Alignment Length: | 2234 | Identity: | 436/2234 - (19%) |
---|---|---|---|
Similarity: | 755/2234 - (33%) | Gaps: | 788/2234 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 331 GEPFLADYGPEESLNESADIEWVNKLWVRRLMRLCALVSLTSVSLNTPKTFERY---PSLQ---- 388
Fly 389 ------------------------------FITFAS--------DTAVTLLFTAEMIAKMHIRGV 415
Fly 416 LHGEVPYLKDHWCQFDASMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRPLIMIRFLRVFLKF 480
Fly 481 SMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQ-FFGELKNHCV---------------- 528
Fly 529 --------MNNTEYDLYKRPILTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGFNG 585
Fly 586 FEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAA-----FYFSTMIFFLAWLVKNVFIAVIT 645
Fly 646 ETF---------------NEIRVQFQQM------------------------------------- 658
Fly 659 ----------------------------------------------------W------------ 659
Fly 660 ---------------------------------------------------GAR----------- 662
Fly 663 -------GHIQKTAASQIL-------------------------SGNDTGWRLV--------TID 687
Fly 688 DNKHGGLAPETCHAILRSPYFRMLV-MSVILAN----------GIVTATMTFKHDGRPRDV---- 737
Fly 738 --FYERYY----------------------YIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFE 778
Fly 779 LLLAAGTT-----------LHIVPM----FYPSG--------------------------LTYFQ 802
Fly 803 VLRVVRLIKASPMLEGFVYKIFGPG-KKLGSLIIFTMCLLIISSSISMQLF------CFLCDFT- 859
Fly 860 -------KFESFPEAFMSMFQILTQEAWVEVMDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSL 917
Fly 918 FVAVIL-----DNLELDEDIKKLKQLKFREQSAEIKETLPF-RLRIFEKFPDSPQMTILHRIPND 976
Fly 977 FMLPKVRESFMKHFVIELETEDSLVENCKRPMSECWESNV----------VFRKQKPVRIMNKTA 1031
Fly 1032 KVRAAGSSLRKLAITHIINDSNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKKFG 1096
Fly 1097 SRSIRRSVRSGSIKLKQTYEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREE 1161
Fly 1162 DLRENHPFFDTPLFLVPRESRFRKICQKIVHARYDARLKDPLTGKERKVQYKSLHNFLGLVTYLD 1226
Fly 1227 W---VMIFATTLSCISMMFETPNYRVMDHPTLQ-IAEYG---FVIFMSLELALKILADGL--FFT 1282
Fly 1283 PKAYIKDVAAALDVFIYVVSTSFLCWMPLNIPTNSAAQLLMILRCVRPLRIFTLVPHMRKVVYEL 1347
Fly 1348 CRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPT---------ISRREDCVGVFMRRVF 1403
Fly 1404 VTKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAVGPVH 1468
Fly 1469 A-------VYIHIY----IFLGCMIGLTLFVGVVIANYSENK-----GTALLTVDQRRWCDLKKR 1517
Fly 1518 LKIAQPLHLPPRPDGRKIRAFTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVHTERLVI-VS 1581
Fly 1582 AVLTFVFVVEVVMKNIAFTPRGY-----WQSRRNRYDLLVTVAGVIWIILQTILRNDLSYFFG-- 1639
Fly 1640 -FMVVIL----RFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFYALAGTILFGTVKYG 1699
Fly 1700 EGIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYCTL-----GNNYWETDCGNFTASL 1759
Fly 1760 IYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDA-LLSYADIRNFQNTWNIVDIHQRGVIPVR 1823
Fly 1824 RVKFILRLLKGRLECDPQKDRLLFKYMCYELDKLHNGEDVTFHDVINMLSYRSVDIRKALQLEEL 1888
Fly 1889 LAREEFEYLVEEEVAKMTIRTWLEGCLKKIRAQNASKQQNSLIAGLRATNEQPVMRPNIQEDKAP 1953
Fly 1954 LGAVDKSAISTISGAVAGACPPTSDAFSPTFSSTENEEKDGSSSAVVQLPHSETSIAGTGSSATG 2018
Fly 2019 AATATGTSSGLGVGPPTVQSTARHVMTVGKRGYALNRSDST------GSSAGRKFLAP-TSSDPQ 2076
Fly 2077 QRS-TLSDK---ERLHITSQQRKK 2096 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 70/370 (19%) |
Ion_trans | 734..927 | CDD:278921 | 60/281 (21%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 78/282 (28%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 60/239 (25%) | ||
scn8a | XP_031751845.1 | Ion_trans | 131..421 | CDD:395416 | 61/320 (19%) |
Na_trans_cytopl | 503..709 | CDD:403218 | 21/211 (10%) | ||
Ion_trans | 759..972 | CDD:395416 | 48/224 (21%) | ||
Na_trans_assoc | 998..1199 | CDD:399489 | 51/298 (17%) | ||
Ion_trans | 1204..1480 | CDD:395416 | 84/304 (28%) | ||
Na_channel_gate | 1472..1524 | CDD:240441 | 11/52 (21%) | ||
Ion_trans | 1529..1783 | CDD:395416 | 65/265 (25%) | ||
GPHH | 1795..1842 | CDD:407139 | 14/89 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |