Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956426.2 | Gene: | scn1laa / 393101 | ZFINID: | ZDB-GENE-040426-751 | Length: | 1955 | Species: | Danio rerio |
Alignment Length: | 2023 | Identity: | 411/2023 - (20%) |
---|---|---|---|
Similarity: | 688/2023 - (34%) | Gaps: | 674/2023 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 399 TLLFTAEMIAKMHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEVLEIVPKFSYLSIMR 463
Fly 464 APRPLIMIRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQ-FFGELKNHC 527
Fly 528 V-------------MNNTEYDLYKRPILTINSLAIPD----TFCSMDPDSGYQCSPGMVCMKMDF 575
Fly 576 LSSYVIGFNGFEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAA-----FYFSTMIFFLAWL 635
Fly 636 VKNVFIAVIT------------------ETFN-------------EIRVQFQQMWGARGHIQKTA 669
Fly 670 AS--------------------------------QILSGND------------------------ 678
Fly 679 ---------------------------------------------TGWR-----LVT-------- 685
Fly 686 --------------------IDDNK------HGGLAP--------------------ETC----- 699
Fly 700 ----------------------------------------------------------------- 699
Fly 700 ------HAILRSPYFRMLVMSVILANGIVTATMTFKHDGRPRDVFYERYYYIELVFTCLLDLETL 758
Fly 759 FKIYCLGWRGYYKHSIHKFELLLAAGTTLHIVPMFYPSGLTY---FQVLRVVRLIKASPMLEGFV 820
Fly 821 YKIFGPGKKLGSLIIFTMCLLI---ISSSISMQLF------CFLCDFTK--------FESFPEAF 868
Fly 869 MSMFQILTQEAWVEVMDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVIL-----DNL-- 926
Fly 927 --ELDEDIKKLKQLKFREQSAEIKETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESFMKH 989
Fly 990 FVIELETEDS----LVENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSSLRKLAITHIIN 1050
Fly 1051 DSNNQRLMLGDSAMLPVVGTKGGGGLK-------SQGTITHSKPWRVDQKKF------GSRSIRR 1102
Fly 1103 SVRSGSIKLKQTYEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLRENH 1167
Fly 1168 PFFDTPLFLVPRESRFRKICQKIVHARYDARLKDPLTGKERKVQYK------SLHNFLGLVTYLD 1226
Fly 1227 WVMIFATTLSCISMMFET--PNYRVMDHPTLQIAEYGFVIFMSLELALKILADGLFFTPKAYIKD 1289
Fly 1290 VAAALDVFIYVVSTSFLCWMPLNIPTNSAAQLLMILRCVRPLRIFTLVPHMRKVVYELCRGFKEI 1354
Fly 1355 LLVSTLLILLMFIFASYGVQLYGGRLARCNDPTISRR---------EDC----VGVFMRRVFVTK 1406
Fly 1407 MKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAVGPVHA-- 1469
Fly 1470 --------VYIHIYIFLGCMIGLTLFVGVVIANYSENK-----GTALLTVDQRRWCDLKKRLKIA 1521
Fly 1522 QPLHLPPRPDGRKIRAFTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVH-TERLVIVSAVLT 1585
Fly 1586 FVFVVEVVMKNIAFTPRGY-----WQSRRNRYDLLVTVAGVIWIILQTILRNDLSYFFG---FMV 1642
Fly 1643 VIL----RFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFYALAGTILFGTVKYGEGIG 1703
Fly 1704 RRANFGSPVTGVAMLFRIVTGEDWNKIMHDCM-VQPPYCTLGNNYWET----DCGNFTASLIYFC 1763
Fly 1764 TFYVIITYIVLNLLVAIIMENFSLFYSNEEDA-LLSYADIRNFQNTWNIVD-----IHQRGVI-- 1820
Fly 1821 -------PVRRVK--------FILRLLKG-RLEC-DPQKDRLLFKYMCY------ELDKLHNG-E 1861
Fly 1862 DVTFHDVINMLSYRSVDIRKALQLEELLAREEFEYLVEEEVAKMTIRTWLEGCLKKIR-AQNASK 1925
Fly 1926 QQNSLIAGLRATNEQPVMRPNIQEDKAPLGAVDKSAISTISGAVAGACPPTSDAFSPTFSS-TEN 1989
Fly 1990 E----EKD 1993 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 67/308 (22%) |
Ion_trans | 734..927 | CDD:278921 | 56/221 (25%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 76/281 (27%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 62/239 (26%) | ||
scn1laa | NP_956426.2 | Ion_trans | 150..416 | CDD:278921 | 63/278 (23%) |
Na_trans_cytopl | 483..594 | CDD:288761 | 9/110 (8%) | ||
Ion_trans | 749..945 | CDD:278921 | 49/207 (24%) | ||
Na_trans_assoc | 972..1161 | CDD:284034 | 45/309 (15%) | ||
Ion_trans | 1184..1438 | CDD:278921 | 77/285 (27%) | ||
Na_channel_gate | 1430..1482 | CDD:240441 | 12/52 (23%) | ||
Ion_trans | 1504..1742 | CDD:278921 | 63/248 (25%) | ||
GPHH | 1752..1801 | CDD:293510 | 7/48 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |