DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment na and Ca-alpha1D

DIOPT Version :9

Sequence 1:NP_001096981.2 Gene:na / 45338 FlyBaseID:FBgn0002917 Length:2233 Species:Drosophila melanogaster
Sequence 2:NP_723952.2 Gene:Ca-alpha1D / 34950 FlyBaseID:FBgn0001991 Length:2705 Species:Drosophila melanogaster


Alignment Length:2367 Identity:511/2367 - (21%)
Similarity:858/2367 - (36%) Gaps:709/2367 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 NSPTTIVNSGSGSG---------GGSSVAFGMQPQQQQQSLAGGGGGGS---SATAAPSSGGGHN 250
            :|...|.|.|.|:|         .|:|...|..|.       |.||.||   |.||...||.|..
  Fly   628 SSAELIDNFGGGAGKFFNIMDFERGASGEGGFSPN-------GNGGPGSGDVSRTARYDSGEGDL 685

  Fly   251 NGAGLGPVVGGGGGGLNLLG------------------GLGGMGGMGGGAAAAGMGICGGISSTV 297
                        |||.|::|                  |..|.||..|||||             
  Fly   686 ------------GGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAA------------- 725

  Fly   298 GSAAITGVPPIGLGIATGIGNKIMLGRKQSLKGGEP----------FLADYGPEESLNESADIEW 352
            |:|                      |:|:..:.|:|          .|:...|..:|.... :||
  Fly   726 GAA----------------------GQKRQQRRGKPQPDRPQRALFCLSVKNPLRALCIRI-VEW 767

  Fly   353 VNKLWVRRLMRLCALVSLTSVSLNTPKTFERYPSLQFITFASDTAVT------------LLFTAE 405
            ..   ...|:.|....:..::::.||     ||       .||:.||            ::||||
  Fly   768 KP---FEFLILLTIFANCIALAVYTP-----YP-------GSDSNVTNQTLEKVEYVFLVIFTAE 817

  Fly   406 MIAKMHIRG-VLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRPLI 469
            .:.|:...| |||... ||::.|...|.::|....||..|.  ::::.......|...|..|||.
  Fly   818 CVMKILAYGFVLHNGA-YLRNGWNLLDFTIVVIGAISTALS--QLMKDAFDVKALRAFRVLRPLR 879

  Fly   470 MIRFLRVFLKFSMPKSRI--NQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQFF-GELKNHCVMNN 531
            ::.        .:|..::  |.|.| :...::::.|..||.:.:|.::|::.| |:|...|....
  Fly   880 LVS--------GVPSLQVVLNSILK-AMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKACRDEI 935

  Fly   532 T-EYDLYKRPILTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGFNG-------FED 588
            | ||:...||             |.:    ||||.||..|..         |::|       |::
  Fly   936 TGEYEENIRP-------------CGV----GYQCPPGYKCYG---------GWDGPNDGITNFDN 974

  Fly   589 IATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAAFYFSTMIFFLAWLVKNVFIAVITETFNEIRV 653
            ...::.||:|..:.|||..::|...|::.:.....||.:|:...|:.|.|:.:.|::..|::.|.
  Fly   975 FGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERN 1039

  Fly   654 QFQQMWGARGHIQKTAASQILSGNDTGW-----RLVTIDDNKHGGL------------------- 694
            :.:.    ||..||....|.:..:..|:     :...|:.:..|||                   
  Fly  1040 KAKN----RGDFQKLREKQQIEEDLRGYLDWITQAEDIEPDAVGGLISDGKGKQPNEMDSTENLG 1100

  Fly   695 --APE------------------------TCHAILRSPYFRMLVMSVILANGIVTATMTFKHDGR 733
              .||                        .|...::|..|..|::.::..|..|.||   :|.|:
  Fly  1101 EEMPEVQMTESRWRKMKKDFDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTGVLAT---EHYGQ 1162

  Fly   734 P--RDVF--YERYYYIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELLLAAG----TTLHIV 790
            .  .|.|  |...::|.| |||    |.|.|:|.||::||:....::|:..:..|    |.|...
  Fly  1163 LDWLDNFQEYTNVFFIGL-FTC----EMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNT 1222

  Fly   791 PMFYPSGLTYFQVLRVVRLIKASP---MLEGFVYKIFGPGKKLGSLIIFTMCLLIISSSISMQLF 852
            .|..|.|::..:.:|::|:.|.:.   .|...|..:....:.:.||::.....::|.:.:.||:|
  Fly  1223 GMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVF 1287

  Fly   853 CFLCDF--------TKFESFPEAFMSMFQILTQEAWVEVM--DETMIRTSKTLTPLVAVYFILYH 907
            ....:|        ..|:.|.:|.:::|||:|.|.|..||  .........:...|..:|||:..
  Fly  1288 GGKFNFDGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILF 1352

  Fly   908 LFVTLIVLSLFVAVILDNLELDEDIKKL-KQLKFREQSAEIKETLPFRLRIFEKFPDSPQMTILH 971
            :....|:|::|:|:.:|||...:.:.:: |:.:..::||:.|.             .||..||  
  Fly  1353 ICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHDESAQKKS-------------HSPTPTI-- 1402

  Fly   972 RIPNDFMLPKVRESFMKHFVIELETEDSLVENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAA 1036
                        :....|..|:::.|                      :|:              
  Fly  1403 ------------DGMDDHLSIDIDME----------------------QQE-------------- 1419

  Fly  1037 GSSLRKLAITHIINDSNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKKFGSRSIR 1101
                        ::|.:                                   ::|.:......:|
  Fly  1420 ------------LDDED-----------------------------------KMDHETLSDEEVR 1437

  Fly  1102 RSVRSGSIKLKQTYEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLREN 1166
                    ::.:..|.:.|.|.|.|.||    |....:...|:|....                 
  Fly  1438 --------EMCEEEEEVDEEGMITARPR----RMSEVNTATKILPIPP----------------- 1473

  Fly  1167 HPFFDTPLFLVPRESRFRKICQKIVHARYDARLKDPLTGKERKVQYKSLHNFLGLVTYLDWVMIF 1231
                .|..||..:.:|||..|..:.:                       |:..|.:         
  Fly  1474 ----GTSFFLFSQTNRFRVFCHWLCN-----------------------HSNFGNI--------- 1502

  Fly  1232 ATTLSCI---SMMFETPN-YRVMD--HPTLQIAEYGFVIFMSLELALKILADGLFFTPKAYIKDV 1290
              .|.||   |.|....| .|..|  :..|...:|.|....::||.||:::.|......|:.:..
  Fly  1503 --ILCCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSA 1565

  Fly  1291 AAALDVFIYVVSTSFLCWMPLNIPTN--SAAQLLMILRCVRPLRIFTLVPHMRKVVYELCRGFK- 1352
            ...||:.:..||.     :.|...:|  |..::|.:||.:||||.......::.||..:....| 
  Fly  1566 FNLLDLLVVCVSL-----ISLVSSSNAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKT 1625

  Fly  1353 --EILLVSTLL---------------------------------ILLMFIFASYGVQLYGGRLAR 1382
              .|:||:.||                                 .||.|:||..||||:.|:..:
  Fly  1626 IGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFK 1690

  Fly  1383 CNDPTISRREDCVGVFMRRVFVTKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEV 1447
            |.|.:...:::|.|.:          |.....:.:...|..|.|:| .||:||::...|||||.|
  Fly  1691 CTDGSKMTQDECYGTY----------LVYDDGDVHKPRLREREWSN-NRFHFDDVAKGMLTLFTV 1744

  Fly  1448 LSFKGWLDVRDVLIKA----VGPVH------AVYIHIYIFLGCMIGLTLFVGVVIANYSENKGTA 1502
            .:|:||..:..|.|.:    .||:|      |.|..|||.:.....:.:|||.||..: :|:|. 
  Fly  1745 STFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTF-QNEGE- 1807

  Fly  1503 LLTVDQRRWCDLKKRLKIAQPLHLPPRPDGRKI--RAFTYDITQHII---FKRVIAVVVLINSML 1562
                .:.:.|||.|..:......|..:|..|.|  ....|.:...:.   |:..|.::::||::.
  Fly  1808 ----QEYKNCDLDKNQRNCIEFALKAKPVRRYIPKHGIQYKVWWFVTSSSFEYTIFILIMINTVT 1868

  Fly  1563 LSITWIKGEV-HTERLVIVSAVLTFVFVVEVVMKNIAFTPRGYWQSRRNRYDLLVTVAGVIWIIL 1626
            |::.:....: :||.|..::.:.|.||.:|.|.|..||..:.|:....|.:|.::.:...|.|:.
  Fly  1869 LAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVY 1933

  Fly  1627 QTILRNDLSYF---------------FGFMVVILRFFTITGKHTTLKMLMLTVGV-----SVCKS 1671
            ..|...|.|..               .|..::.:.||.:......:|:|....|:     :..||
  Fly  1934 SEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKS 1998

  Fly  1672 F----FIIFGMFLLVFFYALAGTILFGTVKY--GEGIGRRANFGSPVTGVAMLFRIVTGEDWNKI 1730
            |    ::...:.||.|.||:.|..:||.:..  |..|....||.:....|.:|||..|||.|.:|
  Fly  1999 FQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAWQEI 2063

  Fly  1731 MHDCMVQPPY-CTLGNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEED 1794
            |..|..||.. |.:.::.....||: :.:..||.:|||:.:::::||.||:||:||.  |...:.
  Fly  2064 MMSCSAQPDVKCDMNSDTPGEPCGS-SIAYPYFISFYVLCSFLIINLFVAVIMDNFD--YLTRDW 2125

  Fly  1795 ALLSYADIRNFQNTWNIVDIHQRGVIPVRRVKFILR----------LLKGRLECDPQKDRLLFKY 1849
            ::|....:..|...|:..|...:|.|....|..:||          |...|:.|    .||:...
  Fly  2126 SILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMAC----KRLVSMN 2186

  Fly  1850 MCYELDKLHNGEDVTFHDVINMLSYRSVDIRKALQLEELLAREEFE------------------- 1895
            |     .|::...|.|:..:..:...|:.|:....:::  |..|..                   
  Fly  2187 M-----PLNSDGTVLFNATLFAVVRTSLSIKTDGNIDD--ANSELRATIKQIWKRTNPKLLDQVV 2244

  Fly  1896 -----------------YLVEEEVAKMTIRTWLEGCLKKIRAQNASKQQNSLIAGLRATNE-QPV 1942
                             ||:::...:...|...||     :..:......:|.||||..:| .|.
  Fly  2245 PPPGNDDEVTVGKFYATYLIQDYFRRFKKRKEQEG-----KEGHPDSNTVTLQAGLRTLHEVSPA 2304

  Fly  1943 MR-------PNIQEDKAPL--------------------GAVDKSAISTIS---GAVA------- 1970
            ::       ..:.::..|:                    |...:||.:|.|   ||:|       
  Fly  2305 LKRAISGNLDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATASQSNGALAIGGSASA 2369

  Fly  1971 -----------GACPPTSDAFSPTFSSTENEEKDGSSSAVVQLPHSETSIAG------TGSSATG 2018
                       |:..|....:  .:.:......||.::....:..:..:.||      .|:.:.|
  Fly  2370 ALGVGGSSLVLGSSDPAGGDY--LYDTLNRSVADGVNNITRNIMQARLAAAGKLQDELQGAGSGG 2432

  Fly  2019 AATATGTSSGL------GVGPPTVQSTARHVMTVGKRGYALNRSDSTGSSAGRKFLAPTSSDPQQ 2077
            .....|.|..:      |.|..||..      |:.....|:|..:.....    .|.|.::....
  Fly  2433 ELRTFGESISMRPLAKNGGGAATVAG------TLPPEANAINYDNRNRGI----LLHPYNNVYAP 2487

  Fly  2078 RSTLSDKERLHITSQQRKKNSMTTLPHAGQLGQLAKQRGGGGEATK------SSSFFAQLNSEIG 2136
            ...|...||: |.|..........||.:..:..||:...||..|.:      .|.|......|:.
  Fly  2488 NGALPGHERM-IQSTPASPYDQRRLPTSSDMNGLAESLIGGVLAAEGLGKYCDSEFVGTAAREMR 2551

  Fly  2137 QFHYPT---INAAA-------AAAALHGYGHGH-------GHGHGGHGGHGG-HGEHQMHHHHGG 2183
            :....|   :|.||       .:.:|.|..:|.       |.|..|.||.|| .|...:.:..||
  Fly  2552 EALDMTPEEMNLAAHQILSNEHSLSLIGSSNGSIFGGSAGGLGGAGSGGVGGLGGSSSIRNAFGG 2616

  Fly  2184 ALGSPSAMMSQMIGGSGKL----LPFN 2206
            :...||::..|....||.|    :|.|
  Fly  2617 SGSGPSSLSPQHQPYSGTLNSPPIPDN 2643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
naNP_001096981.2 Ion_trans 373..654 CDD:278921 76/304 (25%)
Ion_trans 734..927 CDD:278921 56/213 (26%)
Ion_trans 1240..1497 CDD:278921 82/307 (27%)
Ion_trans 1571..1793 CDD:278921 70/249 (28%)
Ca-alpha1DNP_723952.2 Ion_trans 767..1042 CDD:395416 79/327 (24%)
Ion_trans 1137..1379 CDD:395416 66/249 (27%)
Ion_trans 1496..1809 CDD:395416 90/345 (26%)
Ion_trans 1851..2126 CDD:395416 75/277 (27%)
GPHH 2135..2188 CDD:407139 14/61 (23%)
Ca_chan_IQ 2199..2271 CDD:400901 6/73 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439091
Domainoid 1 1.000 91 1.000 Domainoid score I1740
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172471at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R175
SonicParanoid 00.000 Not matched by this tool.
54.880

Return to query results.
Submit another query.