DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment na and para

DIOPT Version :9

Sequence 1:NP_001096981.2 Gene:na / 45338 FlyBaseID:FBgn0002917 Length:2233 Species:Drosophila melanogaster
Sequence 2:NP_001259619.1 Gene:para / 32619 FlyBaseID:FBgn0285944 Length:2145 Species:Drosophila melanogaster


Alignment Length:2205 Identity:417/2205 - (18%)
Similarity:766/2205 - (34%) Gaps:713/2205 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 LCALVSLTSVSLN-----TPKTFERYPSLQFITFASDTAVTLLFTAEMIAKMHIRGVLHGEVPYL 423
            |.:|..:|::.:|     .|.|    |:::    :::...|.::|.|...|:..||.:.....||
  Fly   154 LFSLFIITTILVNCILMIMPTT----PTVE----STEVIFTGIYTFESAVKVMARGFILCPFTYL 210

  Fly   424 KDHWCQFDASMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRPLIMIRFLRVFLKFSMPKSRIN 488
            :|.|...|..:::..::::.:.             |..:.|.|...::|.|:........|:.:.
  Fly   211 RDAWNWLDFVVIALAYVTMGID-------------LGNLAALRTFRVLRALKTVAIVPGLKTIVG 262

  Fly   489 QIFKRSSQQIYNVTLFFLFFMSLYGLLGVQ-FFGELKNHCV-----------MNNTEYDLYKRPI 541
            .:.: |.:.:.:|.:..:|.:|::.|:|:| :.|.|...|:           :.:..:|.:.|  
  Fly   263 AVIE-SVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNR-- 324

  Fly   542 LTINS---------LAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGFNGFEDIATSIFTVY 597
               ||         ::.|  .|.....:| ||....||:: .|..:...|:..|:....:..:.:
  Fly   325 ---NSSNWYSEDEGISFP--LCGNISGAG-QCDDDYVCLQ-GFGPNPNYGYTSFDSFGWAFLSAF 382

  Fly   598 QAASQEGWVFIMYRAIDSLPAWRAAFYFSTMIFFLAWLVKNVFIAVITETFNEIRVQFQQMWGA- 661
            :..:|:.|..:....:.:...|...| |..:||..::.:.|:.:|::..:::|::.:.::...| 
  Fly   383 RLMTQDFWEDLYQLVLRAAGPWHMLF-FIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAE 446

  Fly   662 --------------------RGHIQKTAAS-------------------------QILSGNDTGW 681
                                |.:.|..||:                         ::..|.:.| 
  Fly   447 EEAIREAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKG- 510

  Fly   682 RLVTIDDNKHGGL-------------------APETCH--------------------------- 700
                .|||....:                   ||.|.|                           
  Fly   511 ----NDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSR 571

  Fly   701 -----------------------------------------------------AILRSPYF---- 708
                                                                 ||:...|:    
  Fly   572 SSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636

  Fly   709 -----------------------RMLVM-------------------SVILANGIVTATMT---- 727
                                   .|.||                   ||...||..|...|    
  Fly   637 SRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTCLDTNHKL 701

  Fly   728 -----------------FKHDGRP-------------RDVF------------YER--------Y 742
                             .||...|             :||.            :.|        |
  Fly   702 DHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDRGVSVY 766

  Fly   743 Y---------------------------------------------------YIELVFTCLLDLE 756
            |                                                   ::||..|..:.:.
  Fly   767 YFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKFQEWVSLIVFDPFVELFITLCIVVN 831

  Fly   757 TLF---------------------------------KIYCLGWRGYYKHSIHKFELLLAAGTTLH 788
            |:|                                 |:..:..:.|::...:.|:.::.|.:.|.
  Fly   832 TMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLE 896

  Fly   789 IVPMFYPSGLTY---FQVLRVVRLIKASPMLEGFVYKIFGPGKKLGSL--IIFTMCLLI-ISSSI 847
            : .:....||:.   |::|||.:|.|:.|.|...:..:   |:.:|:|  :.|.:|::| |.:.:
  Fly   897 L-GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIM---GRTMGALGNLTFVLCIIIFIFAVM 957

  Fly   848 SMQLFCFLCDFTK------------FESFPEAFMSMFQILTQEAWVEVMDETMIRTSKTLTPLVA 900
            .||||.......|            |..|..:||.:|::|..| |:|.|.:.|.....:..|   
  Fly   958 GMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMYVGDVSCIP--- 1018

  Fly   901 VYFILYHLFVTLIVLSLFVAVILDNL--------ELDEDIKKLKQLKFREQSAEIKETLPFRLRI 957
             :|:...:...|:||:||:|::|.|.        ..|.|..|                      |
  Fly  1019 -FFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNK----------------------I 1060

  Fly   958 FEKFPDSPQMTILHRIPNDFMLPKVRESFMKHFVIELETEDSLVENCKRPMSECWE------SNV 1016
            .|.|         :||..           .|.:|             ||.:::|::      :|.
  Fly  1061 AEAF---------NRIGR-----------FKSWV-------------KRNIADCFKLIRNKLTNQ 1092

  Fly  1017 VFRKQKPVRIMNKTAKVRAAGSSL-RKLAITHIINDSNNQRLMLGDSAMLPVVGTKGGGGLKSQG 1080
            :..:....| .|:.:.:.:.|..: |.::..|     .:..|.||...:|       ..||..:|
  Fly  1093 ISDQPSGER-TNQISWIWSEGKGVCRCISAEH-----GDNELELGHDEIL-------ADGLIKKG 1144

  Fly  1081 TITHSKPWRV---DQKKFGSRSIRRSVRSGSIKLKQTYEHLMENGDIAAAPRANSGRARPHDLDI 1142
             |.......|   |..:|   :|...:::...| |..|.:...:.|.|:.....|.:.||...:.
  Fly  1145 -IKEQTQLEVAIGDGMEF---TIHGDMKNNKPK-KSKYLNNATDDDTASINSYGSHKNRPFKDES 1204

  Fly  1143 KLLQAKRQQAEMRRNQREEDLRENHPFFDTPLFLVPRESRFRKICQK-------IVHARYDARLK 1200
            ....|:..:.|.:|:..:|||.            :..|......|::       |:|| :|..:.
  Fly  1205 HKGSAETMEGEEKRDASKEDLG------------LDEELDEEGECEEGPLDGDIIIHA-HDEDIL 1256

  Fly  1201 DP----------------LTGKERKVQYKSLHNFLGLVT-------YLDWVMIFATTLSCISMMF 1242
            |.                |.|.:....::...| |.|.|       |.:..:|....:|.:::..
  Fly  1257 DEYPADCCPDSYYKKFPILAGDDDSPFWQGWGN-LRLKTFQLIENKYFETAVITMILMSSLALAL 1320

  Fly  1243 ETPNYRVMDHPTLQIAEYG----FVIFMSLELALKILADGLFFTPKAYIKDVAAALDVFIYVVST 1303
            |  :..:...|.||...|.    |.:...||:.:|.||.|.    |.|..:....||..|.:||.
  Fly  1321 E--DVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGF----KVYFTNAWCWLDFVIVMVSL 1379

  Fly  1304 SFLCWMPLNIPTN-------SAAQLLMILRCVRPLRIFTLVPHMRKVVYELCRGFKEILLVSTLL 1361
                   :|...:       .|.:.:..||.:||||..:.:..||.||..|.:....|..|..:.
  Fly  1380 -------INFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVC 1437

  Fly  1362 ILLMFIFASYGVQLYGGRLARCND--------PTISRREDCVGVFMRRVFVTKMKLTPGPDESYP 1418
            ::...|||..||||:.|:..:|.|        ..|..|..|                  ..|:| 
  Fly  1438 LIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNAC------------------ESENY- 1483

  Fly  1419 AMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKA----VGPVHAVYIHIYIF-- 1477
                  .|.| ...|||::|:|.|.||:|.:||||:.:.:..|.:    ..|:....|::|::  
  Fly  1484 ------TWVN-SAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFV 1541

  Fly  1478 ----LGCMIGLTLFVGVVIANYSENKGTA------LLTVDQRRWCDLKKRLKIAQPLHLPPRPDG 1532
                .|....|.||:||:|.|::|.|..|      .:|.||:::.:..|::...:||...|||..
  Fly  1542 FFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRW 1606

  Fly  1533 RKIRAFTYDITQHIIFKRVIAVVVLINSMLLSI-TWIKGEVHTERLVIVSAVLTFVFVVEVVMKN 1596
            |. :|..::|.....|..:|.:.:.:|...::: .:...:.:...|..::|:...:|..|.::|.
  Fly  1607 RP-QAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKI 1670

  Fly  1597 IAFTPRGYWQSRRNRYDLLVTVAGVIWIILQTILRNDLSYFFGFMVVILRFFTITGKHTTLKM-- 1659
            .|.... |:....|.:|::|.:..::.::|..|:.   .||..  ..:||...:......|::  
  Fly  1671 FALRYH-YFIEPWNLFDVVVVILSILGLVLSDIIE---KYFVS--PTLLRVVRVAKVGRVLRLVK 1729

  Fly  1660 -------LMLTVGVSVCKSFFIIFGMFLLVFFYALAGTILFGTVKYGEGIGRRANFGSPVTGVAM 1717
                   |:..:.:|:...|.|...:||::|.:|:.|...|..||...||....||.:....:.:
  Fly  1730 GAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMIL 1794

  Fly  1718 LFRIVTGEDWNKIMHDCMVQPPYCTLGNN--YWETDCGNFTASLIYFCTFYVIITYIVLNLLVAI 1780
            ||::.|...|:.:: |.::....|...:|  .:..:||:.|..:.:..::.||...||:|:.:|:
  Fly  1795 LFQMSTSAGWDGVL-DAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAV 1858

  Fly  1781 IMENFSLFYSNEEDALLSYADIRNFQNTWNIVDIHQRGVIPVRRVKFILRLLKGRLECDPQKDRL 1845
            |:||:|....:.::.|.. .|...:...|...|......|...::...|.:|:..|:.....   
  Fly  1859 ILENYSQATEDVQEGLTD-DDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPN--- 1919

  Fly  1846 LFKYMCYELD-KLHNGEDVTFHDVINMLSYRSVDIRKALQLE------ELLAREEFE-YLVEEEV 1902
              ||....:| .:..|:.:...|:::.|: :....||...:|      |:.||.:.| |   |.|
  Fly  1920 --KYKIISMDIPICRGDLMYCVDILDALT-KDFFARKGNPIEETGEIGEIAARPDTEGY---EPV 1978

  Fly  1903 AKMTIRTWLEGCLKKIRAQNASKQQNSLIAGLRATNEQPVMRPNIQE---------DKAPLGAVD 1958
            :....|...|.|.:.|  |:|.::..:...|..:      ..|:...         |.||..|.|
  Fly  1979 SSTLWRQREEYCARLI--QHAWRKHKARGEGGGS------FEPDTDHGDGGDPDAGDPAPDEATD 2035

  Fly  1959 KSAISTISGAVAGACPPTSDAFSPTFSSTENEEKDGSSSAVVQLPHSETSIAGTGSSATGAATAT 2023
            ..|.:...|:|.|.....:||          :|.:.:|.       .|.:.|...::|..||..|
  Fly  2036 GDAPAGGDGSVNGTAEGAADA----------DESNVNSP-------GEDAAAAAAAAAAAAAAGT 2083

  Fly  2024 GTSSGLGVGPPTVQSTARHVMTVGKRGYALNRSDSTGSSAGRKFLAPTSSDPQQRSTLSD 2083
            .|:...|.|            :.|::...|..||...:..|.|.:..:.| |...|..:|
  Fly  2084 TTAGSPGAG------------SAGRQTAVLVESDGFVTKNGHKVVIHSRS-PSITSRTAD 2130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
naNP_001096981.2 Ion_trans 373..654 CDD:278921 55/306 (18%)
Ion_trans 734..927 CDD:278921 59/335 (18%)
Ion_trans 1240..1497 CDD:278921 76/285 (27%)
Ion_trans 1571..1793 CDD:278921 53/232 (23%)
paraNP_001259619.1 Ion_trans 165..436 CDD:278921 55/302 (18%)
Na_trans_cytopl 515..648 CDD:288761 7/132 (5%)
Ion_trans 835..1028 CDD:278921 40/201 (20%)
Na_trans_assoc 1054..1296 CDD:284034 58/328 (18%)
Ion_trans 1318..1571 CDD:278921 78/291 (27%)
Na_channel_gate 1561..1613 CDD:240441 15/52 (29%)
Ion_trans 1636..1871 CDD:278921 53/241 (22%)
GPHH 1880..1930 CDD:293510 9/54 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439094
Domainoid 1 1.000 91 1.000 Domainoid score I1740
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R175
SonicParanoid 00.000 Not matched by this tool.
43.870

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