Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038953406.1 | Gene: | Cacna1a / 25398 | RGDID: | 2244 | Length: | 2463 | Species: | Rattus norvegicus |
Alignment Length: | 2395 | Identity: | 503/2395 - (21%) |
---|---|---|---|
Similarity: | 843/2395 - (35%) | Gaps: | 674/2395 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 231 GGGGGGSSATAAPSSGGGHNNGAGLGPVVGGGGGGLNLLGGLGG--MGGMGG---------GAAA 284
Fly 285 AGMGICGGI-----SSTVG---------------SAAITGVPPIG-LGIATGIGNKIMLGRKQSL 328
Fly 329 KGGEPFLADYGPEESLNESADIEWVNKLWVRRLMRLCALVSLTSVSLNTPKTFERYPSLQ--FIT 391
Fly 392 FASDTAVTLLFTAEMIAKMHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEVLEIVPKF 456
Fly 457 SYLSIMRAPRPLIM---IRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQ 518
Fly 519 FF-GELKNHCVMNNTEYDLY---KRPILTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSY 579
Fly 580 VIGFNGFEDIATSIFTVYQAASQEGWVFIMYRAID-SLPAWRAAFYFSTMIFFLAWLVKNVFIAV 643
Fly 644 IT-------------ETFNEIRVQFQQMWGARGHIQ--KTAASQILSGNDT----------GWRL 683
Fly 684 VTIDDNKHGGLAPETCH------AILRSPYFRMLVMSVILANGIVTATMTFKHDGRPRDVFYER- 741
Fly 742 ------------------------------------YYYIELVFTCLLDLETLFKIYCLGWRGYY 770
Fly 771 KHSIHKFELLLAAGTTLHIV-PMFYPS---GLTYFQVLRVVRLIKAS---PMLEGFVYKIFGPGK 828
Fly 829 KLGSLIIFTMCLLIISSSISMQLFCFLCDF------TKFESFPEAFMSMFQILTQEAWVEVMDET 887
Fly 888 MIRTSKTLTPLV-AVYFILYHLFVTLIVLSLFVAVILDNLELDEDIKKLKQLKFREQSAEIKETL 951
Fly 952 PFRLRIFEKFP-DSPQMTILHRIPNDFMLPKVRESFMKHFVIELETEDSLV--ENCKRPMSECWE 1013
Fly 1014 S--------NVVFRKQKPVRI------MNKTAKVRAAGSSLRKLA-------------------- 1044
Fly 1045 -----------------------ITHIINDSNNQRLMLGDS------------------------ 1062
Fly 1063 ---------------AMLPVVGTKGGG--GLKSQGTITHSKPWRVDQKKFGSRSIRRSVRSGS-- 1108
Fly 1109 ---------------------IKLKQTYEHLMENGDIAAAPRANSGRARPHD---------LDIK 1143
Fly 1144 L---------LQAKRQQAEMRR---------NQREEDLRENHPFFDTPLFLVPRESRFRK----- 1185
Fly 1186 ------ICQKIVHARYDARLK---DPLTGKERKVQ-----------------YKSL--------- 1215
Fly 1216 ----HNFLGLVTYLDWVMIFATTLSCISMMFETP-NYRVMDHPTLQIAEYGFVIFMSLELALKIL 1275
Fly 1276 ADGLFFTPKAYIKD---------VAAALDVFIYVVSTSFLCWMPLNIPTNS------AAQLLMIL 1325
Fly 1326 RCVRPLRIFTLVPHMRKVVYELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPTISR 1390
Fly 1391 REDCVGVFMRRVFVTKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLD 1455
Fly 1456 VR----DVLIKAVGP----------VHAVYIHIYIFLGCMIGLTLFVGVVIANYSENKGTAL--- 1503
Fly 1504 -LTVDQRRWCDLKKRLKIAQPL--HLPPRPDGRKIRAFTYDITQHII---FKRVIAVVVLINSML 1562
Fly 1563 LSITWIKGEVHTER-LVIVSAVLTFVFVVEVVMKNIAFTPRGYWQSRRNRYDLLVTVAGVIWIIL 1626
Fly 1627 QTILRN-----DLSYFFGFMVVILRFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFYA 1686
Fly 1687 LAGTILFGTVKY-GEG---------IGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYC 1741
Fly 1742 TLGNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYADIRNFQ 1806
Fly 1807 NTWNIVDIHQRGVIPVRRVKFILRLLKGRL----ECDPQKDRLLFKYMCYELDKLHNGEDVTFHD 1867
Fly 1868 VINMLSYRSVDIRKA------------LQLEEL-----LAREEFEYLVEEE-----------VAK 1904
Fly 1905 MTIRTWLEGCLKKIRAQNASKQQNSLIAGLRATNEQPVMRPNIQEDKAPLGAVDKSAISTISGAV 1969
Fly 1970 AGACPPTSDAFSPTFSSTENEEKDGSSSAVVQLPHSETSIAGTGSSATGAA----TATGTSS--- 2027
Fly 2028 GLGVGPPTVQSTARHV--MTVGKRGYALNRSDS------TGSSAGRKFLAPTSSDPQQR------ 2078
Fly 2079 --STLSDKERLHITSQQRKKNSMTTLPHAGQLGQLA-------------KQRGGGGEATKSSSF- 2127
Fly 2128 -FAQLNSEIGQFHYPTINAAAAAAALHGYGHGHGHGHGGHGGHGGHGEHQMHHHH 2181 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 63/303 (21%) |
Ion_trans | 734..927 | CDD:278921 | 62/243 (26%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 68/286 (24%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 72/237 (30%) | ||
Cacna1a | XP_038953406.1 | Ion_trans | 188..462 | CDD:395416 | 72/361 (20%) |
Ion_trans | 578..816 | CDD:395416 | 59/237 (25%) | ||
PHA03247 | <879..1260 | CDD:223021 | 58/391 (15%) | ||
Ion_trans | 1284..1564 | CDD:395416 | 72/307 (23%) | ||
Ion_trans | 1609..1868 | CDD:395416 | 76/265 (29%) | ||
GPHH | 1877..1930 | CDD:407139 | 10/55 (18%) | ||
Ca_chan_IQ | 1941..2014 | CDD:400901 | 11/72 (15%) | ||
PHA03307 | 2040..>2444 | CDD:223039 | 51/267 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |