Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001277603.1 | Gene: | Scn9a / 20274 | MGIID: | 107636 | Length: | 1984 | Species: | Mus musculus |
Alignment Length: | 2116 | Identity: | 420/2116 - (19%) |
---|---|---|---|
Similarity: | 751/2116 - (35%) | Gaps: | 652/2116 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 326 QSLKGGEPFLADYGPEESLNESADIEWVN-------------------KLWVRRLMRLCALVSLT 371
Fly 372 S----VSLNTPKTFERYPSLQFITFASDTAVTLLFTAEMIAKMHIRGVLHGEVPYLKDHWCQFDA 432
Fly 433 SMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRPLIMIRFLRVFLKFSMPKSRINQIFKRSSQQ 497
Fly 498 IYNVTLFFLFFMSLYGLLGVQ-FFGELKNHCVMNNTEYDLYKRPILTINSLAIPD---------- 551
Fly 552 ------TFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGFNGFEDIATSIFTVYQAASQEGWVFIMY 610
Fly 611 RAIDSLPAWRAA-----FYFSTMIFFLAWLVKNVFIAVITETFNE-----------IRVQFQQM- 658
Fly 659 ----------------------------------------------------------------- 658
Fly 659 ----------------------WGARGH------------------------IQKTAASQILS-- 675
Fly 676 --GNDTGWRLVTIDDN------------------------------------------------- 689
Fly 690 ----------------KHGGLAPET---------------------------CHAILRSPYFRML 711
Fly 712 VMSVILANGIVTATMTFKHDGR--------------------PRDVFYERYYY-------IELVF 749
Fly 750 TCLLDLETLF---------------------------------KIYCLGWRGYYKHSIHKFELLL 781
Fly 782 AAGTTLHIVPMFYP-----SGLTYFQVLRVVRLIKASPMLEGFVYKIFGPG-KKLGSLIIFTMCL 840
Fly 841 LIISSSISMQLF------CFLCDFTK--------FESFPEAFMSMFQILTQEAWVEVMDETMIRT 891
Fly 892 SKTLTPLVAVYFILYHLFVTLIVLSLFVAVIL-----DNL---ELDEDIKKLK--QLKFREQSAE 946
Fly 947 IKETL-PFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESFMKHFVIELETEDSLVENCKRPMSE 1010
Fly 1011 CWESNVVFRKQKPVRIMNKTAKVRAAGSSLRKLAITHIINDSNNQRLMLGDSAMLPVVGTKGGGG 1075
Fly 1076 LKSQGTITHSKPWRVDQKKFGSRSIRRSVRSGSIKLKQTYEHLMENGDIAAAPRANSGRARPHDL 1140
Fly 1141 DIKLLQAKRQQAEMRRNQREEDLRENHPFFDTPLFLVPRES-------RFRKICQKIV-HARYDA 1197
Fly 1198 RLKDPLTGKERKVQYKSLHNFLGLVTYLDWVMIFATTLSCISMMFETPNYRVMDHPTLQ-IAEYG 1261
Fly 1262 ---FVIFMSLELALKILADGLFFTPKAYIKDVAAALDVFIYVVSTSFLCWMPLNIPTNSAAQLLM 1323
Fly 1324 ILRCVRPLRIFTLVPHMRKVVYELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPT- 1387
Fly 1388 --------ISRREDCVGVFMRRVFVTKMKLTPGPDESYPAMLVPRVWANPR----RFNFDNIGDA 1440
Fly 1441 MLTLFEVLSFKGWLDVRDVLIKAVG----PVHA------VYIHIYIFLGCMIGLTLFVGVVIANY 1495
Fly 1496 SENK-----GTALLTVDQRRWCDLKKRLKIAQPLHLPPRPDGRKIRAFTYDITQHIIFKRVIAVV 1555
Fly 1556 VLINSMLLSITWIKGEVHTERLVIVSAVLTFVFVV----EVVMKNIAFTPRGY-----WQSRRNR 1611
Fly 1612 YDLLVTVAGVIWIILQTILRNDLSYFFG---FMVVIL----RFFTITGKHTTLKMLMLTVGVSVC 1669
Fly 1670 KSFFIIFGMFLLVFFYALAGTILFGTVKYGEGIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDC 1734
Fly 1735 M-VQPPYCT-----LGNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEE 1793
Fly 1794 DALLSYADIRNFQNTWNIVDIHQRGVIPVRRVK-FILRLLKGRLECDPQKDRLLFKYMCYELD-K 1856
Fly 1857 LHNGEDVTFHDVINMLSYRSVDIRKALQLEELLAREEFEYL------VEEEVAKMTIR------- 1908
Fly 1909 -TWLEGCLKKIRAQNASKQQNSLIA--GLR---ATNEQPVMRPNIQEDKAPLGAVDKSAISTISG 1967
Fly 1968 AVAGACPPTSDA--------FSPTFSSTENEEKDGS 1995 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 62/313 (20%) |
Ion_trans | 734..927 | CDD:278921 | 60/260 (23%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 75/283 (27%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 64/243 (26%) | ||
Scn9a | NP_001277603.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 26..55 | ||
I. /evidence=ECO:0000305 | 112..410 | 65/332 (20%) | |||
Ion_trans | 147..410 | CDD:278921 | 62/297 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 458..540 | 3/81 (4%) | |||
Na_trans_cytopl | 487..606 | CDD:288761 | 9/118 (8%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 574..609 | 0/34 (0%) | |||
II. /evidence=ECO:0000305 | 725..988 | 63/271 (23%) | |||
Ion_trans | 760..955 | CDD:278921 | 42/203 (21%) | ||
Na_trans_assoc | 981..1185 | CDD:284034 | 53/269 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1015..1039 | 7/28 (25%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1089..1145 | 14/70 (20%) | |||
III. /evidence=ECO:0000305 | 1178..1486 | 87/368 (24%) | |||
Ion_trans | 1224..1464 | CDD:278921 | 72/268 (27%) | ||
Na_channel_gate | 1456..1508 | CDD:240441 | 12/52 (23%) | ||
IV. /evidence=ECO:0000305 | 1495..1793 | 81/312 (26%) | |||
Ion_trans | 1530..1768 | CDD:278921 | 64/251 (25%) | ||
GPHH | 1780..1835 | CDD:293510 | 12/60 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1933..1984 | 17/59 (29%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |