Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006518538.1 | Gene: | Cacna1d / 12289 | MGIID: | 88293 | Length: | 2207 | Species: | Mus musculus |
Alignment Length: | 2055 | Identity: | 447/2055 - (21%) |
---|---|---|---|
Similarity: | 786/2055 - (38%) | Gaps: | 617/2055 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 369 SLTSVSLNTP-----------KTFERYPSLQ----------FITFASDT-------------AVT 399
Fly 400 LLFTAEMIAKMHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEV-LEIVPK-------- 455
Fly 456 --------FSYLSIMRAPRPLIMIRFLRVFLKFSMPKSRI--NQIFKRSSQQIYNVTLFFLFFMS 510
Fly 511 LYGLLGVQ-FFGELKNHCVMNNTEYDLYKRPILTINSLAIPDTFCSMDPDSGYQCSP-GMVCMKM 573
Fly 574 DFLSSYVIGFNG----FEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAAF-YFSTMIFFLA 633
Fly 634 WLVKNVFIAVITETFNEIRVQFQQMWGARGHIQKTAASQIL-----------------------S 675
Fly 676 GNDTGWRLVTIDDN---------------------------KHGGLAP----------------- 696
Fly 697 -------------ETCHAILRSPYFRMLVMSVILANGIVTATMTFKHDGRP------RDVFYERY 742
Fly 743 YYIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELLLAAG----TTLHIVPMFYPSGLTYFQV 803
Fly 804 LRVVRLIKAS---PMLEGFVYKIFGPGKKLGSLIIFTMCLLIISSSISMQLFCFLCDF----TK- 860
Fly 861 --FESFPEAFMSMFQILTQEAWVEVMDETMIR----TSKTLTPLVAVYFILYHLFVTLIVLSLFV 919
Fly 920 AVILDNLELDEDIKKLKQLKFREQSAEIKETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRE 984
Fly 985 SFMKHFVIELETEDSLVENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSSLRKLAITHII 1049
Fly 1050 NDSNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKKFGSRSIRRSVRSGSIKLKQT 1114
Fly 1115 YEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLRENHPFFDTPLFLVPR 1179
Fly 1180 ESRFRKICQKIVHARYDARLKDPLTGKERKVQYKSLHNFLGLVTYLDWVMIFATTLSCISMMFET 1244
Fly 1245 P----NYRVMDHPTLQIAEYGFVIFMSLELALKILADGLFFTPKAYIKDVAAALDVFIYVVSTSF 1305
Fly 1306 LCWMPLNIPTNSAAQLLMILRCVRPLRIFTL---VPHMRKVVYELCRGFKEILLVSTLLILLMFI 1367
Fly 1368 FASYGVQLYGGRLARCNDPTISRREDCVGVFMRRVFVTKMKLTPGPDESYPAMLVPRVWANPRRF 1432
Fly 1433 NFDNIGDAMLTLFEVLSFKGWLDVRDVLIKA-------VGPVH------AVYIHIYIFLGCMIGL 1484
Fly 1485 TLFVGVVIANYSENKGTALLTVDQRRWCDLKKR--------LKIAQPL--HLPPRPDGRKIRAFT 1539
Fly 1540 YDITQHIIFKRVIAVVVLINSMLLSIT-WIKGEVHTERLVIVSAVLTFVFVVEVVMKNIAFTPRG 1603
Fly 1604 YWQSRRNRYDLLVTVAGVI--------------W------IILQTIL------------------ 1630
Fly 1631 ---------RNDLSYFFGFMVVILRFFTITGKHTTLKMLMLTVGVSVCKSF----FIIFGMFLLV 1682
Fly 1683 FFYALAGTILFGTVKYGEG--IGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYCTLGN 1745
Fly 1746 NY---WETDCG-NFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYADIRNFQ 1806
Fly 1807 NTWNIVDIHQRG-------VIPVRRVKFIL---RLLKGRLECDPQKDRLLFKYMCYELDKLHNGE 1861
Fly 1862 DVTFHDVINMLSYRSVDIRKALQLEELLAREEFEYLVEEEVAKMTIR------------------ 1908
Fly 1909 ---TWL-------------EGCLKKIRAQNASKQQNSLIAGLRATNE-QPVMRP----NIQEDKA 1952
Fly 1953 PLGAVDKSAISTISGAVAG-----------------------------ACPPTSDAFSPTFSSTE 1988
Fly 1989 NEEKDGSSSAVVQLPHSETSIAGTGSSATGAATATGTSSGLGVGPPTVQSTARHVMTVGKRGYAL 2053
Fly 2054 NRSDSTGSSAGR-----KFLAPTSSDPQQRSTLSDKERLH 2088 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 74/340 (22%) |
Ion_trans | 734..927 | CDD:278921 | 61/216 (28%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 83/276 (30%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 73/278 (26%) | ||
Cacna1d | XP_006518538.1 | Ion_trans | 125..417 | CDD:366146 | 70/326 (21%) |
Ion_trans | 545..780 | CDD:366146 | 69/246 (28%) | ||
Ion_trans | 905..1182 | CDD:366146 | 92/334 (28%) | ||
Ion_trans | 1224..1523 | CDD:366146 | 77/307 (25%) | ||
GPHH | 1532..1585 | CDD:374878 | 14/61 (23%) | ||
Ca_chan_IQ | 1596..1667 | CDD:370105 | 10/72 (14%) | ||
CAC1F_C | 1690..2206 | CDD:374867 | 38/196 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |