Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_036021662.1 | Gene: | Cacna1c / 12288 | MGIID: | 103013 | Length: | 2245 | Species: | Mus musculus |
Alignment Length: | 2420 | Identity: | 515/2420 - (21%) |
---|---|---|---|
Similarity: | 904/2420 - (37%) | Gaps: | 763/2420 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 108 TPQQQQQQQHPHHQSHH---GHHYAHHQQHTHHHAPPHSHHPHPHPHGHPHSYPHLRHSQPASAS 169
Fly 170 QFSFNPSPGSSPGNGLGLGARQDAASALNSPTTIVNSGSGSGGGSSVAFGMQPQQQQQSLAGGGG 234
Fly 235 -----GGSSATAAPSSGGGHNNGAGLGPVVGGGGGGLNLLGGLGGMGGMGGGAAAAGMGICGGIS 294
Fly 295 STVGSAAITGV--PPIGLGI-ATGIGNKIMLGRKQSLKGGEPFLADYGPEESLN-ESADIEWVNK 355
Fly 356 LWVRRLMRLCALVSLTSVSLNTPKTFERYPSLQFITFASDTAVTLLFTAEMIAKMHIRGVLHGEV 420
Fly 421 PYLKDHWCQFDASMVSFLWISIILQIFE-VLEIVPKFSYLSIM---------RAPRPLIMIRFLR 475
Fly 476 VFLKFSMPKSRI--NQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQ-FFGELKNHCVMNNTEYDLY 537
Fly 538 KRPILTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGFNG-------FEDIATSIFT 595
Fly 596 VYQAASQEGWVFIMYRAIDS----LPAWRAAFYFSTMIFFLAWLVKNVFIAVITETFNEIRVQFQ 656
Fly 657 QMWGARGHIQKTAASQILSGNDTGW-----RLVTID-----------------------DNKHGG 693
Fly 694 LA--------------PET---------------------------------------------C 699
Fly 700 HAILRSPYFRMLVMSVILANGIVTATMTFKHDGRPRDVFYERYYYIELVFT------CLLDLETL 758
Fly 759 FKIYCLGWRGYYKHSIHKFELLLAAGTTLHIV----PMFYPSGLTYFQVLRVVRLIKAS---PML 816
Fly 817 EGFVYKIFGPGKKLGSLIIFTMCLLIISSSISMQLFCFLCDF-------TKFESFPEAFMSMFQI 874
Fly 875 LTQEAWVEVMDETMIRTSKTLTP--LVAVYFILYHLFVTLIVLSLFVAVILDNLELDEDIKKLKQ 937
Fly 938 LKFREQSAEIKETL--PFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESFMKHFVIELETEDSL 1000
Fly 1001 VENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSSLRKLAITHIINDSNNQRLMLGDSAML 1065
Fly 1066 PVVGTKGGGGLKSQGTITHSKPWRVDQKKFGSRSIRRSVRSGSIKLKQTYEHLMENGDIAAAPRA 1130
Fly 1131 NSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLRENH------PFFD-TPLFLVPRESRFRKICQ 1188
Fly 1189 KIVHARYDARL--------------KDPLTGKERKVQYKSLHNFLGLVTYLDWVMIFATTLSCIS 1239
Fly 1240 MMFETPNYRVMDHPTLQIAEYGFVIFMSLELALKILADGLFFTPKAYIKDVAAALDVFIYVVSTS 1304
Fly 1305 FLCW----MPLNIPTNSAAQLLMILRCVRPLRIFTL---VPHMRKVVYELCRGFKEILLVSTLLI 1362
Fly 1363 LLMFIFASYGVQLYGGRLARCNDPTISRREDCVGVFMRRVFVTKMKLTPGPDESYPAMLVPRVWA 1427
Fly 1428 NPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAV-------GPVH------AVYIHIYIFLG 1479
Fly 1480 CMIGLTLFVGVVIANYSENKGTALLTVDQRRWCDLKKR--------LKIAQPL--HLPPRPDGRK 1534
Fly 1535 IRAFTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVHTERLV--IVSAVLTFVFVVEVVMKNI 1597
Fly 1598 AFTPRGYWQSRRNRYDLLVTVAGVIWIILQTILRNDLSYFF-------------GFMV------- 1642
Fly 1643 -------------------VILRFFTITGKHTTLKMLMLTVGV-----SVCKSF----FIIFGMF 1679
Fly 1680 LLVFFYALAGTILFGTVKYGE--GIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCM------- 1735
Fly 1736 -VQPPYCTLGNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSY 1799
Fly 1800 ADIRNFQNTWNIVDIHQRG-------VIPVRRVKFIL---RLLKGRLECDPQKDRLLFKYMCYEL 1854
Fly 1855 DKLHNGEDVTFHDVINMLSYRSVDIRKALQLEELLAREEFEYLV--------------------- 1898
Fly 1899 -EEEVAKMTIRTWLEGCLKKIRAQNAS------KQQN--SLIAGLRATNE-QPVMRPNIQEDKAP 1953
Fly 1954 LGAVDKSAISTISGAV-------AGACPPT------SDA---FSPTFSSTE--NEEKDGSSSAVV 2000
Fly 2001 QLPHSE---------TSIAGTGSSA---TGAATATG-----------TSSGLGVGPP-----TVQ 2037
Fly 2038 STARHVMTVGKRGYALNRSDSTGSSAGRKFL------------APTSSDPQQRST----LSDKER 2086
Fly 2087 LHITSQQRKKNSMTTLP-----HAGQLGQ--------LAKQRGGGGEATKSSSF----------- 2127
Fly 2128 FAQLNSEIGQFHYPT 2142 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 66/304 (22%) |
Ion_trans | 734..927 | CDD:278921 | 55/214 (26%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 75/276 (27%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 72/281 (26%) | ||
Cacna1c | XP_036021662.1 | Ion_trans | 153..446 | CDD:395416 | 79/376 (21%) |
Ion_trans | 578..819 | CDD:395416 | 66/253 (26%) | ||
Ion_trans | 957..1254 | CDD:395416 | 90/348 (26%) | ||
Ion_trans | 1296..1593 | CDD:395416 | 78/309 (25%) | ||
GPHH | 1602..1655 | CDD:407139 | 14/61 (23%) | ||
Ca_chan_IQ | 1666..1737 | CDD:400901 | 10/72 (14%) | ||
CAC1F_C | 1759..2194 | CDD:407123 | 64/298 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |