Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446153.2 | Gene: | Cacna1f / 114493 | RGDID: | 621535 | Length: | 1980 | Species: | Rattus norvegicus |
Alignment Length: | 2198 | Identity: | 475/2198 - (21%) |
---|---|---|---|
Similarity: | 814/2198 - (37%) | Gaps: | 687/2198 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 236 GSSATAAPSSGGGHNNGAGLGPVVGGGGGGLNLLGGLGGMGGMGGGAAAAGMGICGGISSTVGSA 300
Fly 301 AITGVPPIGLGIATGIGNKIMLGRKQSLKGGEPFLADYGPEESLNESADIEWVNKLWVRRLMRLC 365
Fly 366 ALVSLTS------VSLNTPKTFERYPSLQ----------FITFASDTAVT-------------LL 401
Fly 402 FTAEMIAKMHIRG-VLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEV-LEIVP---------- 454
Fly 455 ------KFSYLSIMRAPRPLIMIRFLRVFLKFSMPKSRI--NQIFKRSSQQIYNVTLFFLFFMSL 511
Fly 512 YGLLGVQ-FFGELKNHCVMNNTEYDLYKRPILTINSLAIPDTFCSMDPDSGYQCS---------- 565
Fly 566 PGMVCMKMDFLSSYVIGFNGFEDIATSIFTVYQAASQEGWVFIMYRAIDS----LPAWRAAFYFS 626
Fly 627 TMIFFLAWLVKNVFIAVITETFN------EIRVQFQQM---------------W----------- 659
Fly 660 -------------GARGH------------------------IQKTAASQILSGNDTGWRLVT-- 685
Fly 686 IDDNKHGGLAPET-------------------------CHAILRSPYFRMLVMSVILANGIVTAT 725
Fly 726 MTFKHDGRPRDVFY-ERYYYIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELLLAAG----T 785
Fly 786 TLHIVPMFYPSGLTYFQVLRVVRLIKAS---PMLEGFVYKIFGPGKKLGSLIIFTMCLLIISSSI 847
Fly 848 SMQLFCFLCDF----TK---FESFPEAFMSMFQILTQEAWVEVMDETMIRTSKTLTP--LVAVYF 903
Fly 904 ILYHLFVTLIVLSLFVAVILDNLELDEDIKKLKQLKFREQSAEIKETLPFRLRIFEKFPDSPQMT 968
Fly 969 ILHRIPNDFMLPKVRESFMKHFVIELETEDSLVENCKRPMSECWESNVVFRKQKPVRIMNKTAKV 1033
Fly 1034 RAAGSSLRKLAITHIINDSNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKKFGSR 1098
Fly 1099 SIRRSVRSGSIKLKQTYEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDL 1163
Fly 1164 RENHPFFDTPLFLVPRESRFRKICQKIVHARYDARLKDPLTGKERKVQYKSLHNFLGLVTYLDWV 1228
Fly 1229 MIFATTLSCISMMFETP----NYRVMDHPTLQIAEYGFVIFMSLELALKILADGLFFTPKAYIKD 1289
Fly 1290 VAAALDVFIYVVSTSFLCWMPLNIPTNSAAQLLMILRCVRPLRIFTL---VPHMRKVVYELCRGF 1351
Fly 1352 KEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPTISRREDCVGVFMRRVFVTKMKLTPGPDES 1416
Fly 1417 YPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAV-------GPVH------ 1468
Fly 1469 AVYIHIYIFLGCMIGLTLFVGVVIANY----SENKGTALLTVDQRRWCDLKKRLKIAQPL--HLP 1527
Fly 1528 PRPDGRKIRAFTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVHTER-------LVIVSAVLT 1585
Fly 1586 FVFVVEVVMKNIAFTPRGYWQSRRNRYDLLVTVAGVIWIILQTI-------------LRNDLSYF 1637
Fly 1638 FGFMVVILRFFTITGKHTTLKMLMLTVGVSVCKSF----FIIFGMFLLVFFYALAGTILFGTVKY 1698
Fly 1699 GEG--IGRRANFGSPVTGVAMLFRIVTGEDWNKIM------HDCMVQPPYCTLGNNYWETDCG-N 1754
Fly 1755 FTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYADIRNFQNTWNIVDIHQRGV 1819
Fly 1820 IPVRRVKFILRLLK-----GRLECDPQKDRLLFKYMCYELDKLHNGEDVTFHDVINMLSYRSVDI 1879
Fly 1880 RKALQLEELLAREEFEYLV--------------------EEE--VAKMTIRTWLEGCLKKIRAQN 1922
Fly 1923 ASKQQNSLIAGLRATNEQPVMRPNIQ--EDKAPLGAVDKSAISTISGAVAGACPPTSDAFSPTFS 1985
Fly 1986 STENEEKDGSSSAVVQLPHSETSIAGTGSSATGAATATGTSSGLGVGPPTVQSTARHVMTVGKRG 2050
Fly 2051 YALNRSDSTGSSAGRKFLAPTSSDPQQRSTLSDKERLHITSQQRKKNS---MTTLPHAGQLGQLA 2112
Fly 2113 KQRG--GGGEATKSSSFFAQLNSEIGQFHYPTINAAAAAAALHGYGHGHGHGH 2163 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 71/344 (21%) |
Ion_trans | 734..927 | CDD:278921 | 65/209 (31%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 80/280 (29%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 74/254 (29%) | ||
Cacna1f | NP_446153.2 | Ion_trans | 91..383 | CDD:395416 | 69/335 (21%) |
Ion_trans | 532..763 | CDD:395416 | 72/236 (31%) | ||
Ion_trans | 869..1106 | CDD:395416 | 79/288 (27%) | ||
Ion_trans | 1188..1451 | CDD:395416 | 78/282 (28%) | ||
GPHH | 1460..1513 | CDD:407139 | 13/56 (23%) | ||
Ca_chan_IQ | 1524..1595 | CDD:400901 | 11/72 (15%) | ||
CAC1F_C | 1618..1977 | CDD:407123 | 40/226 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |