Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016861136.1 | Gene: | SCN11A / 11280 | HGNCID: | 10583 | Length: | 1916 | Species: | Homo sapiens |
Alignment Length: | 1839 | Identity: | 381/1839 - (20%) |
---|---|---|---|
Similarity: | 698/1839 - (37%) | Gaps: | 467/1839 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 320 IMLGRKQSLK--GGEPFLADYGPEESLNESADIEWVNKLWVRRLMRLCALVSLTSVSLNTPKTFE 382
Fly 383 RYPSLQFITFASDTA---VTLLFTAEMIAKMHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIIL 444
Fly 445 QIFEVLEIVPKFSYLSIMRAPRPLIMIRFLRVF--LKFSMPKSRINQI---FKRSSQQIYNVTLF 504
Fly 505 FLFFMSLYGLLGVQ-FFGELKNHCV------MNNTE-YD--LYKR---PILTINSLAIPDTFCSM 556
Fly 557 DPDSGYQCSPGMVCMKMDFLSSYVIGFNGFEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRA 621
Fly 622 AFYFSTMIFFLAWLVKNVFIAVITETFN--------EIRVQFQQMWGARGHIQKTAASQILSGND 678
Fly 679 TGWRLVTID---------------------------DNKHGGLAPETC----------------- 699
Fly 700 ----------------------------------------------------------------- 699
Fly 700 HAILRSPYFRMLVMSVILANGIVTATMTFKHDGRPRDVFYERYYYI-ELVFTCLLDLETLFKIYC 763
Fly 764 LGWRGYYKHSIHKFE---LLLAAGTTLHIV--PMFYPSGLTYFQVLRVVRLIKASPMLEGFVYKI 823
Fly 824 FGPG-KKLGSLIIFTMCLLIISSSISMQLF--CF-------LCDFT----------KFESFPEAF 868
Fly 869 MSMFQILTQEAWVEVMDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVILD-------NL 926
Fly 927 ELDEDIKKLK-QL---KFREQSAEIKETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESFM 987
Fly 988 KHFVIELETEDSLVENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSSLRKLAITHIIND- 1051
Fly 1052 ---SNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPW------RVDQKKFGSRSIRRSVRSG 1107
Fly 1108 SIKLKQTYEHLMENGDIAAAPRANSGRARPHDLDI-------KLLQAKRQQAEMRRNQRE---ED 1162
Fly 1163 LRENHPFFDTPLFLVPRESRFRKI---------CQKIVHARYDARLKDP--LTGKERKVQYKSLH 1216
Fly 1217 NFLGLVTYLDWVMIFATTLSCISMMFETPNYRVMDHPTLQ----IAEYGFVIFMSLELALKILAD 1277
Fly 1278 GLFFTPKAYIKDVAAALDVFIYVVSTSFLCWMPLNIPTNSAAQLLMILRCVRPLRIFTLVPHMRK 1342
Fly 1343 VVYELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPTISRREDCVGVFMRRVFVTKM 1407
Fly 1408 KLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAVGPVHA--- 1469
Fly 1470 ----------VYIHIYIFLGCMIGLTLFVGVVIANYSENK-----GTALLTVDQRRWCDLKKRLK 1519
Fly 1520 IAQPLHLPPRPDGRKIRAFTYDITQHIIFKRVIAVVVLINSM-LLSITWIKGEVHTERLVIVSAV 1583
Fly 1584 LTFVFVVEVVMKNIAFTPRGYWQSRRNRYDLLVTVAGVIWIILQTILRNDLSYFFG---FMVVIL 1645
Fly 1646 ----RFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFYALAGTILFGTVKYGEGIGRRA 1706
Fly 1707 NFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYCTLGNNYWETDCGNFTASLIYFCTFYVIITY 1771
Fly 1772 IVLNLLVAIIMENFSLFYSNEEDALLSYADIRNFQNTWNIVDIHQRGVIPVRRVKFI-------- 1828
Fly 1829 -------LRLLKGRLECDPQKDRLLFKYMCYEL-----DKLHNGEDVTFHDVINML-SYRSVDIR 1880
Fly 1881 KALQLEELLAREEFEYLVE 1899 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 66/309 (21%) |
Ion_trans | 734..927 | CDD:278921 | 66/225 (29%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 70/273 (26%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 53/228 (23%) | ||
SCN11A | XP_016861136.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |