Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031749252.1 | Gene: | scn2a / 100486750 | XenbaseID: | XB-GENE-6447552 | Length: | 1970 | Species: | Xenopus tropicalis |
Alignment Length: | 2060 | Identity: | 402/2060 - (19%) |
---|---|---|---|
Similarity: | 721/2060 - (35%) | Gaps: | 648/2060 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 355 KLWVRRLMRLCALVSLTS----VSLNTPKTFERYPSLQFITFASDTAVTLLFTAEMIAKMHIRGV 415
Fly 416 LHGEVPYLKDHWCQFDASMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRPLIMIRFLRVFLKF 480
Fly 481 SMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQ-FFGELKNHCVM----NNTEYDLY--- 537
Fly 538 -----------KRPILTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGFNGFEDIAT 591
Fly 592 SIFTVYQAASQEGWVFIMYRAIDSLPAWRAA-----FYFSTMIFFLAWLVKNVFIAVITETFNE- 650
Fly 651 ----------IRVQFQQMWGARGHIQKTAA--------SQILSGNDTG----------------- 680
Fly 681 -------WR-------------------------------------------------------- 682
Fly 683 ----------------------------------------------------------------- 682
Fly 683 -----------LVTIDDNKHG------------------GLAPETCHA----------------I 702
Fly 703 LRSPYFRMLVMSVILANGIVTATMTFKHDGRPR-------------------------------- 735
Fly 736 -DVFYE---------------------RYYYIEL------VFTCLLDLETLFKIYCLGWRGYYKH 772
Fly 773 SIHKFELLLAAGTTLHIVPMFYPSG-----LTYFQVLRVVRLIKASPMLEGFVYKIFGPG-KKLG 831
Fly 832 SLIIFTMCLLIISSSISMQLF--------CFL---CDFTKF--ESFPEAFMSMFQILTQEAWVEV 883
Fly 884 MDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVILDNLELDEDIKKLKQLKFREQSAEIK 948
Fly 949 ETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKV--RESFMKHFVIELE--TEDSLVENCKRPMS 1009
Fly 1010 ECWESNVVFRKQKPVRIMNKTAKVRAA-------GSSLRKLAITHIINDSNNQRLMLGDSAMLPV 1067
Fly 1068 VGTKGGGGLKSQGTITHSKPWRVDQKKFGSRSIRRSVRSGSIKLKQTYEHLMENGDIAAAPRANS 1132
Fly 1133 GRARPHDLDIKLLQAKRQQAEMRRNQREEDLRENHPFFDTPLFLVPRESRFRKICQKIVHARYDA 1197
Fly 1198 RLKDPLTGKE----RKVQYKSLHNFLGLVTYLDWVMIFATTLSCISMMFE------TPNYRVMDH 1252
Fly 1253 PTLQIAEYGFVIFMSLELALKILADGLFFTPKAYIKDVAAALDVFIYVVSTSFLCWMPLNIPTNS 1317
Fly 1318 AAQLLMILRCVRPLRIFTLVPHMRKVVYELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLAR 1382
Fly 1383 CNDPT---------ISRREDCVGVFMRRVFVTKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIG 1438
Fly 1439 DAMLTLFEVLSFKGWL-------DVRDVLIKAVGPVHA------VYIHIYIFLGCMIGLTLFVGV 1490
Fly 1491 VIANYSENK-----GTALLTVDQRRWCDLKKRLKIAQPLHLPPRPDGRKIRAFTYDITQHIIFKR 1550
Fly 1551 VIAVVVLINSMLLSI-TWIKGEVHTERLVIVSAVLTFVFVVEVVMKNIAFTPRGYWQSRRNRYDL 1614
Fly 1615 LVTVAGVIWIILQTILRNDLSYFFG---FMVVIL----RFFTITGKHTTLKMLMLTVGVSVCKSF 1672
Fly 1673 FIIFGMFLLVFFYALAGTILFGTVKYGEGIGRRANFGSPVTGVAMLFRIVTGEDWNKIMH----- 1732
Fly 1733 ---DCMVQPPYCTLGNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEED 1794
Fly 1795 A-LLSYADIRNFQNTWNIVDIHQRGVI--------------PVR-----RVKFI---LRLLKG-R 1835
Fly 1836 LEC-DPQKDRLLFKYMCY------ELDKLH----------NGEDVTFHDVINMLSYRSVDIRKAL 1883
Fly 1884 QLEELLAREEFEYLVEEEVAKMTIRTWLEGCLKKIRAQNASKQQNSLIAGLRATNEQPVMRPNIQ 1948
Fly 1949 EDKAPLGAVDKSAISTISGAVAGACPPTSDAFSPTFSSTENEEKD 1993 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 63/315 (20%) |
Ion_trans | 734..927 | CDD:278921 | 57/271 (21%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 73/284 (26%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 61/236 (26%) | ||
scn2a | XP_031749252.1 | Ion_trans | 127..408 | CDD:395416 | 64/323 (20%) |
Na_trans_cytopl | 488..678 | CDD:403218 | 9/192 (5%) | ||
Ion_trans | 727..940 | CDD:395416 | 50/220 (23%) | ||
Na_trans_assoc | 966..1175 | CDD:399489 | 50/283 (18%) | ||
Ion_trans | 1179..1454 | CDD:395416 | 78/311 (25%) | ||
Na_channel_gate | 1446..1498 | CDD:240441 | 10/52 (19%) | ||
Ion_trans | 1503..1758 | CDD:395416 | 67/263 (25%) | ||
GPHH | 1770..1817 | CDD:407139 | 7/46 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |