Sequence 1: | NP_001096981.2 | Gene: | na / 45338 | FlyBaseID: | FBgn0002917 | Length: | 2233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031760488.1 | Gene: | scn5a / 100485924 | XenbaseID: | XB-GENE-6037407 | Length: | 1989 | Species: | Xenopus tropicalis |
Alignment Length: | 2097 | Identity: | 411/2097 - (19%) |
---|---|---|---|
Similarity: | 724/2097 - (34%) | Gaps: | 732/2097 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 371 TSVSLNTPKTFERY---PSLQFIT-----------------FA----------------SDTAVT 399
Fly 400 L---------LFTAEMIAKMHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEVLEIVPK 455
Fly 456 FSYLSIMRAPRPLIMIRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQ-F 519
Fly 520 FGELKNHCVMNNTEYDLYKRPILTINSLAIPDTF---------------------CSMDPDSGYQ 563
Fly 564 CSPGMVCMKMDFLSSYVIGFNGFEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAA-----F 623
Fly 624 YFSTMIFFLAWLVKNVFIAVITETFNEIRV-----------QFQQMW------------------ 659
Fly 660 ----------------------------------------------------------------- 659
Fly 660 ----------------------------------GARGHI--------QKTAA--SQILSGNDTG 680
Fly 681 W-----RLVTIDDN----------------KHGGL-----------APETC-------------- 699
Fly 700 -HAI----LRSPYFRMLVMSVILANGIVTATMTFKHDGRPR-----DVFYERYY----------- 743
Fly 744 -----------YIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELLLAAGT-------TLHIV 790
Fly 791 -------PMFY---------------------------PSGLTYFQVLRVVRLIKASPMLEGFVY 821
Fly 822 KIFGPG-KKLGSLIIFTMCLLIISSSISMQLF--------CFL---CDFTKF--ESFPEAFMSMF 872
Fly 873 QILTQEAWVEVMDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVIL-----DNLEL-DED 931
Fly 932 ---------IKKLKQ-LKFREQSAEIKETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESF 986
Fly 987 MKHFVIELETEDSLVEN------------CKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSS 1039
Fly 1040 LRKLAITHIINDSNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKKFGSRSIRRSV 1104
Fly 1105 RSGSI---------KLKQTYEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQRE 1160
Fly 1161 EDLRE--NHPFFDTPLFLVPRESRFRKICQKIVHARYDARLKDPLTG------KERKVQYKSL-H 1216
Fly 1217 NFLGLVTYLDWVMIFATTLSCISMMFET--PNYRVMDHPTLQIAEYGFVIFMSLELALKILADGL 1279
Fly 1280 FFTPKAYIKDVAAALDVFIYVVSTSFLCWMPLNIPTNSAAQLLMILRCVRPLRIFTLVPHMRKVV 1344
Fly 1345 YELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDP---------TISRREDCVGVFMR 1400
Fly 1401 RVFVTKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKAVG 1465
Fly 1466 -------PVHAV------YIHIYIFLGCMIGLTLFVGVVIANYSENK-----GTALLTVDQRRWC 1512
Fly 1513 DLKKRLKIAQPLHLPPRPDGRKIRAFTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVHTERL 1577
Fly 1578 VI-VSAVLTFVFVVEVVMKNIAFTPRGY-----WQSRRNRYDLLVTVAGVIWIILQTILRNDLSY 1636
Fly 1637 FFG---FMVVIL----RFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFYALAGTILFG 1694
Fly 1695 TVKYGEGIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQ-PPYC----------TLGNNYW 1748
Fly 1749 ETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFS----------------LFY------SN 1791
Fly 1792 EEDALLSYADIRNFQNTWNIVDIHQRGVIPVR-----RVKFI---LRLLKG-RLEC--------- 1838
Fly 1839 ---------DPQKDRLLFKYMCYELDKLHNGEDVTFHDVINMLSYRSVD-----IRKALQLEELL 1889
Fly 1890 ARE----EFEY--------LVEEEVAKMTIRTWLEGCLKKIRAQNASKQQNSLIAGLRATNEQP- 1941
Fly 1942 ---VMRPNIQEDKAPLG 1955 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
na | NP_001096981.2 | Ion_trans | 373..654 | CDD:278921 | 67/363 (18%) |
Ion_trans | 734..927 | CDD:278921 | 63/279 (23%) | ||
Ion_trans | 1240..1497 | CDD:278921 | 72/280 (26%) | ||
Ion_trans | 1571..1793 | CDD:278921 | 67/267 (25%) | ||
scn5a | XP_031760488.1 | Ion_trans | 129..424 | CDD:395416 | 59/317 (19%) |
Na_trans_cytopl | 485..675 | CDD:403218 | 21/192 (11%) | ||
Ion_trans | 724..937 | CDD:395416 | 52/223 (23%) | ||
Na_trans_assoc | 963..1176 | CDD:399489 | 48/320 (15%) | ||
Ion_trans | 1180..1453 | CDD:395416 | 79/308 (26%) | ||
Na_channel_gate | 1445..1497 | CDD:240441 | 12/52 (23%) | ||
Ion_trans | 1502..1757 | CDD:395416 | 68/269 (25%) | ||
GPHH | 1769..1816 | CDD:407139 | 12/55 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |