DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL12 and rplK

DIOPT Version :10

Sequence 1:NP_524819.1 Gene:RpL12 / 45329 FlyBaseID:FBgn0034968 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_418410.1 Gene:rplK / 948484 ECOCYCID:EG10872 Length:142 Species:Escherichia coli


Alignment Length:141 Identity:34/141 - (24%)
Similarity:62/141 - (43%) Gaps:17/141 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDI-AKATSDWKGLKITVCLTIQNRQA--AISVV 74
            |.|:...|....:..:.|.:|..|::..:..... ||..|..|||.|.|.:|:...::  .::..
E. coli     9 VKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKT 73

  Fly    75 PSAASLIIKA--LK----EPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVL 133
            |.||.|:.||  :|    :|.:|:        .|.|....:..||:.........:::...:.:.
E. coli    74 PPAAVLLKKAAGIKSGSGKPNKDK--------VGKISRAQLQEIAQTKAADMTGADIEAMTRSIE 130

  Fly   134 GTAQSVGCTVD 144
            |||:|:|..|:
E. coli   131 GTARSMGLVVE 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL12NP_524819.1 PLN03072 1..165 CDD:178621 34/141 (24%)
rplKNP_418410.1 rplK 1..142 CDD:234661 34/141 (24%)

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