DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL12 and RPL12B

DIOPT Version :9

Sequence 1:NP_524819.1 Gene:RpL12 / 45329 FlyBaseID:FBgn0034968 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_010706.3 Gene:RPL12B / 852026 SGDID:S000002826 Length:165 Species:Saccharomyces cerevisiae


Alignment Length:163 Identity:114/163 - (69%)
Similarity:137/163 - (84%) Gaps:0/163 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITVCLTIQ 65
            |||||||.|||.:|||.|||||||:::||||||||||||||:|:||||||.::||:|:||.|.||
Yeast     1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTVQLKIQ 65

  Fly    66 NRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCK 130
            |||||.||||||:||:|.|||||||||||.||:||||||..::|:.|||.||.:|..|.|....|
Yeast    66 NRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKSFGRTLASVTK 130

  Fly   131 EVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVP 163
            |:|||||||||.||.|:|||:|:.:|.|.||:|
Yeast   131 EILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL12NP_524819.1 PLN03072 1..165 CDD:178621 114/163 (70%)
RPL12BNP_010706.3 PLN03072 1..165 CDD:178621 114/163 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343496
Domainoid 1 1.000 105 1.000 Domainoid score I1463
eggNOG 1 0.900 - - E1_COG0080
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128047
Inparanoid 1 1.050 238 1.000 Inparanoid score I699
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53975
OrthoFinder 1 1.000 - - FOG0001897
OrthoInspector 1 1.000 - - otm46956
orthoMCL 1 0.900 - - OOG6_100843
Panther 1 1.100 - - LDO PTHR11661
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1108
SonicParanoid 1 1.000 - - X1252
TreeFam 1 0.960 - -
1514.790

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