DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL12 and PRPL11

DIOPT Version :10

Sequence 1:NP_524819.1 Gene:RpL12 / 45329 FlyBaseID:FBgn0034968 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_174575.1 Gene:PRPL11 / 840194 AraportID:AT1G32990 Length:222 Species:Arabidopsis thaliana


Alignment Length:155 Identity:37/155 - (23%)
Similarity:67/155 - (43%) Gaps:21/155 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPL----GLSPKKIGDDIAKATSDWKGLKITVCL 62
            |||......|:|.:..:..|.|..:. ||.:||.    |::......|....|:|..|..|.|.:
plant    64 PPKPGGKAKKVVGVIKLALEAGKATP-APPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEI 127

  Fly    63 TIQNRQAAISVV--PSAASLIIKAL------KEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPR 119
            |:.:.::...::  |.|:.|::||.      |:|.:|:        .|.|..:.:..||....|.
plant   128 TVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDK--------VGVITIDQLRTIAAEKLPD 184

  Fly   120 SMARELKGTCKEVLGTAQSVGCTVD 144
            .....::...:.:.|||.::|..:|
plant   185 LNCTTIESAMRIIAGTAANMGIDID 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL12NP_524819.1 PLN03072 1..165 CDD:178621 37/155 (24%)
PRPL11NP_174575.1 rplK 71..208 CDD:234661 33/145 (23%)

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