DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL12 and AT5G60670

DIOPT Version :10

Sequence 1:NP_524819.1 Gene:RpL12 / 45329 FlyBaseID:FBgn0034968 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_200875.1 Gene:AT5G60670 / 836188 AraportID:AT5G60670 Length:166 Species:Arabidopsis thaliana


Alignment Length:166 Identity:113/166 - (68%)
Similarity:142/166 - (85%) Gaps:1/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATS-DWKGLKITVCLTI 64
            ||||.||:::..||:|..||||||.||||||||||||:|||||:||||.|: :||||::||.||:
plant     1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTV 65

  Fly    65 QNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTC 129
            |||||.::||||||:|:|||||||.|||||.|||||:|||.|:|::.||::|||||:|:||.||.
plant    66 QNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPRSIAKELSGTV 130

  Fly   130 KEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVPAE 165
            ||:|||..|||||||||.|.|:.:|:|.|.|::|.|
plant   131 KEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL12NP_524819.1 PLN03072 1..165 CDD:178621 112/164 (68%)
AT5G60670NP_200875.1 PLN03072 1..166 CDD:178621 112/164 (68%)

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