DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL12 and AT5G51610

DIOPT Version :10

Sequence 1:NP_524819.1 Gene:RpL12 / 45329 FlyBaseID:FBgn0034968 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_199974.1 Gene:AT5G51610 / 835235 AraportID:AT5G51610 Length:182 Species:Arabidopsis thaliana


Alignment Length:124 Identity:29/124 - (23%)
Similarity:50/124 - (40%) Gaps:29/124 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 ENVERWLRE-----LRDHADQNIVIMLVGNKSDLRHLRAVPTD-----EAKGFAERNGLSFIETS 154
            |.:||:.|:     |....|::.:      .:..|....:..|     |:|.:....|.:|:...
plant   341 ERIERYSRKVFVGGLPPDIDEDEI------TASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQ 399

  Fly   155 ALDSTNVETAFQNILTE---IYRIVSQKQIRDPPEGSVIRP-NLENIDV-----KPTNP 204
              :.::|:......|.|   :|..||...|:|.|  ..||| ||.:.|.     :|.:|
plant   400 --EESSVQALIDACLEEDGKLYLCVSSPTIKDKP--VQIRPWNLSDSDFVMDGSQPLDP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL12NP_524819.1 PLN03072 1..165 CDD:178621 13/74 (18%)
AT5G51610NP_199974.1 Ribosomal_L11 71..168 CDD:475185
Blue background indicates that the domain is not in the aligned region.

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