DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL12 and Mrpl11

DIOPT Version :9

Sequence 1:NP_524819.1 Gene:RpL12 / 45329 FlyBaseID:FBgn0034968 Length:165 Species:Drosophila melanogaster
Sequence 2:XP_006531884.1 Gene:Mrpl11 / 66419 MGIID:2137215 Length:205 Species:Mus musculus


Alignment Length:127 Identity:27/127 - (21%)
Similarity:55/127 - (43%) Gaps:17/127 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LAPKIGPLGLSPKKIGDDIAKATSDWK-GLKITVCLTIQ-NRQAAISVVPSAASLIIKALKEPPR 90
            |.|.:|..|:|..:...:..:.|.|.| |:.:...:.|: :|...:.:.....|..:||.     
Mouse    82 LGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTVSYFLKAA----- 141

  Fly    91 DRKKQKNIKHSGN-----IGFEDILAIARV-MRPRSMARE---LKGTCKEVLGTAQSVGCTV 143
             ...:|..:|:|.     :..:.:..||.| .:..:.|.:   |....:.::|:|:|:|..|
Mouse   142 -AGIEKGARHTGKEVAGLVSLKHVYEIACVKAKDDAFAMQDVPLSSVVRSIIGSARSLGIRV 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL12NP_524819.1 PLN03072 1..165 CDD:178621 27/127 (21%)
Mrpl11XP_006531884.1 RL11 67..203 CDD:197819 27/127 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0080
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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