DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and AT3G29340

DIOPT Version :10

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_189580.1 Gene:AT3G29340 / 822592 AraportID:AT3G29340 Length:650 Species:Arabidopsis thaliana


Alignment Length:238 Identity:52/238 - (21%)
Similarity:72/238 - (30%) Gaps:94/238 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 RSSSSSSYQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIH------------SDTRP----- 440
            :|::.|.........:|..:.:||.|||||:....|..|..||            |:..|     
plant    23 KSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKL 87

  Fly   441 ----------YPCQYCGKRFHQKSDMKKHTYIHTG------------------------------ 465
                      |.|:.|||.|.....:..||.:|..                              
plant    88 QKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSF 152

  Fly   466 -----EKPHKCTVCLKAFSQ--------SSNLITHMRKHTGYKPFGCH--LCDQSFQRKVDL--- 512
                 ||...|....:.||:        .|.|.:.::..|.:|. .||  :|.:||.....|   
plant   153 KVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKS-SCHCKICGKSFVCSQGLGNH 216

  Fly   513 -RRHRE---------SRHEEAPPVED--------LKPLKMEVS 537
             |.|||         ...|:..|..|        .||...|||
plant   217 KRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVS 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 9/21 (43%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
zf-C2H2 441..463 CDD:395048 8/21 (38%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
zf-H2C2_2 455..480 CDD:463886 7/59 (12%)
C2H2 Zn finger 471..491 CDD:275368 5/27 (19%)
zf-H2C2_2 483..506 CDD:463886 6/24 (25%)
C2H2 Zn finger 499..516 CDD:275368 7/22 (32%)
AT3G29340NP_189580.1 zf-C2H2_6 43..68 CDD:433576 11/24 (46%)
C2H2 Zn finger 45..65 CDD:275368 9/19 (47%)
zf-C2H2_6 98..122 CDD:433576 9/23 (39%)
C2H2 Zn finger 100..120 CDD:275368 7/19 (37%)

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