DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and gfi1aa

DIOPT Version :10

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001018612.1 Gene:gfi1aa / 553814 ZFINID:ZDB-GENE-050522-534 Length:385 Species:Danio rerio


Alignment Length:465 Identity:146/465 - (31%)
Similarity:193/465 - (41%) Gaps:153/465 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 PLTPM-----TPKSPASVVLGQRDRDFALTPE-------KEHE-----LQMNNNNENSKQDYQEQ 131
            |.:|:     :||:.......|..:.|.|:.|       .::|     |....:.:..|......
Zfish    43 PESPLDVGNQSPKASMVCTADQSSQQFPLSCEGSVCDRSSDYEDFWRPLSSGTSPDLDKCPVPSP 107

  Fly   132 DEDMPLNLSTKERITSDDSNRDQYHSSSNNSSRSSSSSEVEQLHPMTSLNVTPPPLSAVNLKSSS 196
            |:..|.::|.:..:.|        ||||            |..|.:.|.|       .|::.|.|
Zfish   108 DDSQPFDMSFRPYVWS--------HSSS------------ELRHLIQSCN-------RVSVDSDS 145

  Fly   197 TP---QQQRQRSQGNIIWSPASMCERSARR--EQYGLKMEEQGDEEEHQVDPIVRKFKYERRTAS 256
            :.   ....:||..:::..|.     .:||  :.||.......|......|     ||...:.|.
Zfish   146 SVGVYDAMDRRSSAHLLIQPT-----QSRRFYQDYGSLTPNLLDNRGFYTD-----FKMSTKVAE 200

  Fly   257 ISSLQSPISSLSAPASNAVQDLEFEVAQQQLYAHRSAFMAGLTGNNLELLTQHLKLKSEQ----P 317
            ..|                                   .:.:|...|:|...:..:|..:    |
Zfish   201 TDS-----------------------------------ESDMTCTRLQLSGSYKCIKCTKVFSTP 230

  Fly   318 QQQQQQHRIKDEQQQDNRSAAALMNLVAAAEFGYMRNQHQQPQQQQQQQLHHQQQPQQHQ--HQQ 380
                  |.::...::.:.........:....||                  |....:||:  |.|
Zfish   231 ------HGLEVHVRRSHSGTRPFACEICGKTFG------------------HAVSLEQHKAVHSQ 271

  Fly   381 QHPDSTATDVARRSSSSSSYQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQY 445
            :                             |.|.||.|.||||||||||||||||||||||||||
Zfish   272 E-----------------------------RVFSCKICDKSFKRSSTLSTHLLIHSDTRPYPCQY 307

  Fly   446 CGKRFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKV 510
            |||||||||||||||:||||||||||.||.||||||||||||.|||||:|||||.||.:.|||||
Zfish   308 CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKV 372

  Fly   511 DLRRHRESRH 520
            |||||:|::|
Zfish   373 DLRRHKETQH 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 18/21 (86%)
C2H2 Zn finger 415..435 CDD:275368 17/19 (89%)
zf-C2H2 441..463 CDD:395048 20/21 (95%)
C2H2 Zn finger 443..463 CDD:275368 18/19 (95%)
zf-H2C2_2 455..480 CDD:463886 21/24 (88%)
C2H2 Zn finger 471..491 CDD:275368 16/19 (84%)
zf-H2C2_2 483..506 CDD:463886 17/22 (77%)
C2H2 Zn finger 499..516 CDD:275368 12/16 (75%)
gfi1aaNP_001018612.1 COG5048 <89..379 CDD:227381 135/414 (33%)
C2H2 Zn finger 220..241 CDD:275368 3/26 (12%)
C2H2 Zn finger 249..269 CDD:275368 5/37 (14%)
SFP1 <272..354 CDD:227516 72/110 (65%)
C2H2 Zn finger 277..297 CDD:275368 17/19 (89%)
C2H2 Zn finger 305..325 CDD:275368 18/19 (95%)
C2H2 Zn finger 333..353 CDD:275368 16/19 (84%)
C2H2 Zn finger 361..380 CDD:275368 13/18 (72%)

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