DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and CG4730

DIOPT Version :10

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster


Alignment Length:415 Identity:89/415 - (21%)
Similarity:155/415 - (37%) Gaps:85/415 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 LNLSTKERITSDDSNRDQYHSSSNNSSRSSSSSE-----VEQLHPMTSLNVT-----PPPLSAVN 191
            ||.:...|..........:..|.::|:.|...|.     :|:.:|...|::|     ...||..:
  Fly    12 LNFTIARRTAEAPVKLVSHEVSLSDSTTSLELSNCCRLCLEEPYPNQMLDMTVIYDQEAALSYYD 76

  Fly   192 LKSSSTPQQQRQRSQGNIIWSPASMCERSARREQYGLKMEEQGDEEEHQVDPIVRKFKYERRTAS 256
            .....|.:..||..:.    .|.::|:|.|                      :..|:.|:...  
  Fly    77 CYEICTKEDLRQNPKN----EPRTLCKRCA----------------------VELKWAYDFHK-- 113

  Fly   257 ISSLQSPISSLSAPASNAVQDLEFEVAQQQLYAHRSAFMAGLTGNNLELLTQHLKLKSEQPQQQQ 321
                                  :..:|.|||   |..|:|  |..|.|   |...::.|:.:...
  Fly   114 ----------------------KMAIANQQL---REIFVA--TEANTE---QEDDVEDEENEADM 148

  Fly   322 QQHRIKDE-QQQDNRSAAALMNLVAAAEFGYMRNQHQQPQQQQ--QQQLHHQQQPQQHQ--HQQQ 381
            .:..:.:| :::......:|.::|.       ||:|......:  .::..:..:..:||  |...
  Fly   149 NEEFLMEEIEEKQETPIDSLEDIVP-------RNRHTGKSNCKFCHKEFRNHSRMAKHQMIHLAN 206

  Fly   382 HPDSTATDVARRSSSSSSYQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQYC 446
            .|:...:...|...:..:.:...:.|.......|..|||.|..:..|..|...|:...||.|..|
  Fly   207 RPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCDTCGKVFAIAKALEIHKRYHNRDFPYSCDLC 271

  Fly   447 GKRFHQKSDMKKHTYI-HTGEKPHKCTV--CLKAFSQSSNLITHMRKHTGYKPFGCHLCDQSFQR 508
            .:||.|:|.:..|..: |:|.: ..|..  |.|:|:.||:|..|...||. .||.|..|.||:..
  Fly   272 DRRFAQRSHLTVHQQVKHSGSR-FICEFPGCQKSFTSSSSLRNHECTHTA-MPFECAHCHQSYPA 334

  Fly   509 KVDLRRHRESRHEEAPPVEDLKPLK 533
            :..||.|.|.:|.....:|||:.::
  Fly   335 RNKLRMHLERKHNMVVQMEDLEEMR 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 7/21 (33%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-C2H2 441..463 CDD:395048 8/22 (36%)
C2H2 Zn finger 443..463 CDD:275368 7/20 (35%)
zf-H2C2_2 455..480 CDD:463886 7/27 (26%)
C2H2 Zn finger 471..491 CDD:275368 8/21 (38%)
zf-H2C2_2 483..506 CDD:463886 9/22 (41%)
C2H2 Zn finger 499..516 CDD:275368 6/16 (38%)
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 19/130 (15%)
C2H2 Zn finger 183..203 CDD:275368 2/19 (11%)
C2H2 Zn finger 212..232 CDD:275368 1/19 (5%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..289 CDD:275368 7/20 (35%)
C2H2 Zn finger 296..318 CDD:275368 8/21 (38%)
C2H2 Zn finger 325..346 CDD:275368 8/20 (40%)

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