DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and CG6654

DIOPT Version :10

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster


Alignment Length:556 Identity:113/556 - (20%)
Similarity:182/556 - (32%) Gaps:215/556 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 NLSTKERIT--SDDSNRDQYHSSSNNSSRSSSSSEVEQLHPMTSLNVTP-PPLSAVNLKSSSTPQ 199
            ||..|..::  |:.||...:.....||||:     :.||.|    |..| .|.|.|::   |.|.
  Fly    46 NLPEKVCLSCLSEISNCYTFKIKCENSSRT-----LRQLLP----NALPEEPDSKVSI---SCPV 98

  Fly   200 QQRQRSQGNIIWSPASMCERSARRE------------------QYGLKMEEQGDEEEHQV--DPI 244
            ....::.....|.| ..|..|.:.:                  ...|..|.:|:..::::  :|:
  Fly    99 ATTDQAVQTTSWEP-DRCTASVQTDAVTTTDAEQNTSLIKSTISVDLDYEGEGEVFDYELPDEPV 162

  Fly   245 VRKFKYERRTASISSLQSPI---SSLSAPASNAVQDLEFEVAQQQLYAHRSAFMAGLTGNNLELL 306
                  |:.|:.|..:|..:   ..:....:|.:.:.:....:||:.....|...|: .|..|::
  Fly   163 ------EKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHELEQQIRECNLAIFEGV-DNEAEII 220

  Fly   307 TQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAAAEFGYMRNQHQQP--QQQQQQQLHH 369
            |      ...||...::...|...||:|                   ::||.|  .:::.::|..
  Fly   221 T------VTAPQVTTRKSAAKLLTQQEN-------------------DKHQTPVGSKEEARELEK 260

  Fly   370 QQQPQ-----------------------------QH----------------------------- 376
            :|.||                             ||                             
  Fly   261 EQVPQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTP 325

  Fly   377 -------------------------------------------------QHQQQH-----PDSTA 387
                                                             :||..|     |:...
  Fly   326 ELKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGAHNCPECGI 390

  Fly   388 TDVARRSSSSSSYQGENEEKRSGRN---------------------------FQCKQCGKSFKRS 425
            ...::.:.|....||   .||:.||                           |.|..|||||.::
  Fly   391 RCDSKEALSKHMVQG---HKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQN 452

  Fly   426 STLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITHMRK 490
            :.|..|.|.||:|:.:.|:.|...|..|:::..|...|||:||.:|.|||..|:.|.:|..|.||
  Fly   453 ANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRK 517

  Fly   491 HTGYKPFGCHLCDQSFQRKVDLRRHRESRHEEAPPV 526
            |||.:|:.|.||...|.....|:.||.:...|.|.|
  Fly   518 HTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYV 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 10/21 (48%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
zf-C2H2 441..463 CDD:395048 5/21 (24%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
zf-H2C2_2 455..480 CDD:463886 11/24 (46%)
C2H2 Zn finger 471..491 CDD:275368 9/19 (47%)
zf-H2C2_2 483..506 CDD:463886 11/22 (50%)
C2H2 Zn finger 499..516 CDD:275368 5/16 (31%)
CG6654NP_650429.1 zf-AD 6..78 CDD:214871 10/36 (28%)
C2H2 Zn finger 331..354 CDD:275368 0/22 (0%)
COG5048 <357..570 CDD:227381 58/200 (29%)
C2H2 Zn finger 360..380 CDD:275368 2/19 (11%)
C2H2 Zn finger 385..406 CDD:275370 4/23 (17%)
C2H2 Zn finger 414..434 CDD:275368 0/19 (0%)
C2H2 Zn finger 442..490 CDD:275368 17/47 (36%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
C2H2 Zn finger 498..518 CDD:275368 9/19 (47%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
C2H2 Zn finger 554..574 CDD:275368 113/556 (20%)
C2H2 Zn finger 582..602 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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