DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and su(Hw)

DIOPT Version :9

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster


Alignment Length:538 Identity:115/538 - (21%)
Similarity:183/538 - (34%) Gaps:156/538 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 SSATALGTPLTPMTPKSPASVVLGQRDRDFALTPEK----EHELQMNNNNENSKQD-----YQEQ 131
            |:|.|..|.......|:|::.|..........:|.|    ||.:.....:||:|.|     ..|:
  Fly    92 STAPAASTVKILNEKKTPSATVTAVETTKIKTSPSKRKKMEHYVLQAVKSENTKADTTVTVVTEE 156

  Fly   132 DEDMPLNLSTKER---------------ITSDDSN--RDQYHSSSNNSSRSSSSSEVEQLHPMTS 179
            |:.:...|:..|.               :|.||.:  .|......::|.:.:||           
  Fly   157 DDTIDFILADDEEVVPGRIENNNGQEIVVTEDDEDLGEDGDEDGEDSSGKGNSS----------- 210

  Fly   180 LNVTPPPLSAVNLKSSSTPQQQRQRSQGNIIWSPASMCERSARREQ--------------YGL-K 229
                                   |.....|:......|.::.||.|              |.| |
  Fly   211 -----------------------QTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRK 252

  Fly   230 MEEQGDEEEHQVDPIVRKFK---------YERRTASISSLQSPISSLSAPASNAVQDLEFEVAQQ 285
            .:...:.|:.:.|.:|.:.|         |:  |..:..:..|    ..|.|...| ..:|....
  Fly   253 ADMLKNLEKIEKDAVVMEKKDICFCCSESYD--TFHLGHINCP----DCPKSFKTQ-TSYERHIF 310

  Fly   286 QLYAHRSAFMAGLTGNNL--ELLTQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAAAE 348
            ..::..|.|...:...||  |.|   |.|..||.:.:.:.:..|                :...:
  Fly   311 ITHSEFSDFPCSICNANLRSEAL---LALHEEQHKSRGKPYACK----------------ICGKD 356

  Fly   349 FGYMRNQHQQPQQQQQQQLHHQQQPQQ--------------HQHQQQHPDSTATDVARRSSSSSS 399
            |  .|:.|.:..|:......::.....              ..|.:||   ..|.|.::.     
  Fly   357 F--TRSYHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHLKQH---LGTQVVKKP----- 411

  Fly   400 YQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHT 464
                        .:.|..|...|...|||:.|:..|:..:|:.|..|.|:|.....:|||...||
  Fly   412 ------------EYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHT 464

  Fly   465 GEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLRRHRESRHEEAPPVEDL 529
            ||||:.||||.:||:....|..||::|||.:|..|..|.:||.:...||.|.:: |....|.|..
  Fly   465 GEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTHSKT-HIRPFPCEQC 528

  Fly   530 -------KPLKMEVSSSS 540
                   |.|:..|.:.|
  Fly   529 DEKFKTEKQLERHVKTHS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 7/21 (33%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
COG5048 423..>497 CDD:227381 31/73 (42%)
zf-H2C2_2 428..452 CDD:290200 8/23 (35%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
zf-H2C2_2 455..480 CDD:290200 15/24 (63%)
C2H2 Zn finger 471..491 CDD:275368 9/19 (47%)
C2H2 Zn finger 499..516 CDD:275368 6/16 (38%)
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 5/25 (20%)
COG5048 <312..517 CDD:227381 62/245 (25%)
C2H2 Zn finger 321..341 CDD:275368 7/22 (32%)
zf-C2H2 348..368 CDD:278523 4/37 (11%)
C2H2 Zn finger 350..368 CDD:275368 4/35 (11%)
C2H2 Zn finger 382..402 CDD:275368 1/19 (5%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-H2C2_2 428..451 CDD:290200 7/22 (32%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
zf-H2C2_2 455..479 CDD:290200 14/23 (61%)
COG5048 <467..620 CDD:227381 29/81 (36%)
C2H2 Zn finger 471..491 CDD:275368 9/19 (47%)
zf-H2C2_2 484..508 CDD:290200 11/23 (48%)
C2H2 Zn finger 499..519 CDD:275368 7/20 (35%)
C2H2 Zn finger 525..545 CDD:275368 4/19 (21%)
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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