DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sens and topi

DIOPT Version :9

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster


Alignment Length:618 Identity:130/618 - (21%)
Similarity:219/618 - (35%) Gaps:194/618 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 FLLSSATALGTPLTPMTPKSPASVVLGQRDRDFALTPEKEHELQMNNNNENSKQDYQEQDEDMPL 137
            |.:..|.||     ||    |..||:   :|..| .|..:..||    ..:.|:.:..|.|.|.:
  Fly    56 FAVGPAGAL-----PM----PTDVVV---ERTLA-DPAFKQILQ----EADGKKGFDPQAEQMKI 103

  Fly   138 N--LS--TKERITSDDSNRDQYHSSSNNSSRSS------------------------------SS 168
            .  |:  |..::|::.|   .:|.|.:|||.|:                              :.
  Fly   104 RDFLAGVTSSKMTTEQS---VFHGSRSNSSASTVNRIKCPTCLVQFDAVAFQNHSCEAKPIEVAV 165

  Fly   169 SEVEQLHPMTSLNVTPPPLSAVNLKSSSTPQQQRQR-----------------SQGNIIWSP--A 214
            .:.|:.|.:.:::..|.|||....:......|.|.|                 |:.|....|  .
  Fly   166 PQQEKPHLVPTVSAPPAPLSKPASERVIRENQVRLRRYIKDEMKYDLATGIESSRKNAAKGPNEC 230

  Fly   215 SMCERS--------ARREQYGLKM-EEQGDEEEHQVDP-----IVR-----KFKYERRTASISSL 260
            :||:|.        ...|::.|.: ..|..|:.|.:..     :|:     :..|:.:.|....|
  Fly   231 TMCDRKFVHASGLVRHMEKHALDLIPSQTSEQPHTIPAAGLHVVVKCNSCGRIFYDPQVAFRHGL 295

  Fly   261 ----------QSPISSLSAPASNA-----VQDLEFEVAQQQLYA---------HRSAFMAGLTGN 301
                      |||::.:  |::.|     :.|.|..:.....:|         .:..|.:.:.|:
  Fly   296 IHDSEHSTMRQSPMTQV--PSNRADFNELLLDGEMLIDNDPAFATSNQNTNPPKKEMFSSLILGS 358

  Fly   302 NL-------------ELLTQHLKLKSEQPQQ----QQQQHRIKDEQ---QQD---NRSAAALMNL 343
            .|             |||.......:|:..:    ..|.:..|:..   |.|   .|.|...:|:
  Fly   359 VLQCEFCEYIFADIAELLVHSASHVAERRFECTACDIQMNTAKEASIHFQTDCIFMREAIRSLNV 423

  Fly   344 VAAAEFGYMRNQHQQP-------QQQQQQQLHHQQQPQQHQHQQQHP-------DSTATDVARRS 394
            ..:..|  :.|..:..       |:.:....|:..:..::..:...|       ...|.|....|
  Fly   424 TLSRYF--VCNVCELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVNFEFAHDFLAHS 486

  Fly   395 SSS--SSYQGENEEKRSG----RNFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQ--------- 444
            ...  :..:.|.|.:.:|    |.:.|..||||:.:||.|..||..|...:|:.||         
  Fly   487 EEKHLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQEENCDRKFT 551

  Fly   445 ----------------------YCGKRFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITH 487
                                  .|||||...|...:|..||.||:.::|..|.|.|.::..|..|
  Fly   552 IRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNH 616

  Fly   488 MRKHTGYKPFGCHLCDQSFQRKVDLRRHRESRH 520
            .|.|||.||:.|..|.::|:::.|..:|..:||
  Fly   617 QRIHTGEKPYSCLFCTKTFRQRGDRDKHIRARH 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 10/21 (48%)
C2H2 Zn finger 415..435 CDD:275368 10/19 (53%)
COG5048 423..>497 CDD:227381 31/104 (30%)
zf-H2C2_2 428..452 CDD:290200 12/54 (22%)
C2H2 Zn finger 443..463 CDD:275368 9/50 (18%)
zf-H2C2_2 455..480 CDD:290200 9/24 (38%)
C2H2 Zn finger 471..491 CDD:275368 7/19 (37%)
C2H2 Zn finger 499..516 CDD:275368 4/16 (25%)
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368 4/19 (21%)
C2H2 Zn finger 277..297 CDD:275368 3/19 (16%)
C2H2 Zn finger 431..453 CDD:275368 2/21 (10%)
COG5048 <450..647 CDD:227381 51/196 (26%)
C2H2 Zn finger 469..490 CDD:275368 3/20 (15%)
zf-C2H2 511..533 CDD:278523 10/21 (48%)
C2H2 Zn finger 513..564 CDD:275368 14/50 (28%)
C2H2 Zn finger 541..561 CDD:275368 2/19 (11%)
zf-H2C2_2 555..581 CDD:290200 5/25 (20%)
C2H2 Zn finger 572..592 CDD:275368 7/19 (37%)
zf-H2C2_2 585..609 CDD:290200 9/23 (39%)
zf-C2H2 598..620 CDD:278523 7/21 (33%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
zf-H2C2_2 612..637 CDD:290200 11/24 (46%)
C2H2 Zn finger 628..646 CDD:275368 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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