DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and pita

DIOPT Version :9

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:506 Identity:104/506 - (20%)
Similarity:169/506 - (33%) Gaps:172/506 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VIASAAAQKLNGRDLP---FLYNPLLYSSALLWPQFLLSSATALGT-PLT-----PM-TPKSPAS 95
            ::|..|.:...|..:|   .|...||:.....:.|....:.|.|.. |||     |: .|::|.:
  Fly    47 IMAITAIEVYAGDGMPGHICLECRLLFEHCYRFKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMT 111

  Fly    96 VVLGQRDRDFALTPEKEHELQMNNNNENSKQDYQEQDEDMPLNLSTKERITSDDSNRDQYHSSSN 160
            :|..::   ..:.|.|..|                 ..:.|..|                   .|
  Fly   112 MVASKK---LLVVPAKTAE-----------------PSETPKKL-------------------LN 137

  Fly   161 NSSRSSSSSEVEQLHPMTSLNVTPPPLSAVNLKSSSTPQQQRQRSQGNIIWSPASMCERSARREQ 225
            ..::|||...:|.:..:.|..|||..::.    ||..|:                      |...
  Fly   138 TMAKSSSQVIIEDVQVLESAMVTPRTVAG----SSPVPR----------------------RSHA 176

  Fly   226 YGLKMEEQGDEEEHQVDPIVRKF--KYERRTASISSLQSPI-------SSLSAPASNAVQDLEFE 281
            |.||::...:.....|..::...  :.|:....|....||:       ||:..........:|..
  Fly   177 YELKVDNNQELSMDDVQSMLEDMASELEKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPR 241

  Fly   282 VAQQQLYAHRSAFMAGLTGNNLELLTQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAA 346
            :|..::....|..:|.:|    |:|...|.|               |:|....::|         
  Fly   242 LATPKVKRDDSGNVAIVT----EVLDSDLPL---------------DDQDDPTKNA--------- 278

  Fly   347 AEFGYMRNQHQQPQQQQQQQLHHQQQPQQHQHQQQHPDSTATDVARRSSSSSSYQGENEEKRSGR 411
                                                 :..||||                     
  Fly   279 -------------------------------------EKVATDV--------------------- 285

  Fly   412 NFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCLK 476
             |.|..|.:||.....|..|.|.|:.:|.:.|..|.|.|..|.|:.||.::||||:|.||.:|.|
  Fly   286 -FPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSK 349

  Fly   477 AFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLRRHRESRHEEAPPVE 527
            ||::.:.|..|.|.||....|.|..|::.|..:.::.:|.| ||::..|.:
  Fly   350 AFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAE-RHQKKRPFQ 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 8/21 (38%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
COG5048 423..>497 CDD:227381 29/73 (40%)
zf-H2C2_2 428..452 CDD:290200 9/23 (39%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
zf-H2C2_2 455..480 CDD:290200 14/24 (58%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..516 CDD:275368 3/16 (19%)
pitaNP_611806.3 zf-AD 17..92 CDD:214871 10/44 (23%)
COG5048 <281..506 CDD:227381 47/142 (33%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
zf-H2C2_2 328..353 CDD:290200 14/24 (58%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 104/506 (21%)
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 456..476 CDD:275368
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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