DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sens and CG17568

DIOPT Version :9

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:401 Identity:87/401 - (21%)
Similarity:158/401 - (39%) Gaps:112/401 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 SARREQYGL-------------KMEEQGDEEEHQVDPIVRKFKYERRTASISSLQSPISSLSAPA 271
            :|.|:|:||             .:|.:.|....:...:::.|.    .|..||.:..||..:. .
  Fly   103 AALRQQFGLCDDDWTHIIKPIPALEMESDNVYQKPAELLKDFP----LAETSSQEMEISKRTT-T 162

  Fly   272 SNAVQ---DLEFEVAQQQLYAHRSAFMAGLTGNNLELLTQHLKLK---SEQPQQQQQQHRIKD-- 328
            ::.:|   ::|.|:.:|:        ...|....||..|..|.::   .|.||::..|.|:..  
  Fly   163 THLIQTKKNVEMEIPKQE--------FIDLGPILLEKNTSQLDMEDVLDELPQEELSQPRLDSTT 219

  Fly   329 ---EQQQDNRSA---------------AALMNLVAA--------------AEFGYM--------- 352
               ..:.|.:|.               ..||:|||.              |:.|.|         
  Fly   220 SPASMENDVKSEMLDSCEGDDDFLPVDGQLMDLVAVATTPNTLESTAEEKAKRGRMDCEKCGKVY 284

  Fly   353 RNQHQQPQQQQQQQLHHQQQPQQHQHQQQHPDSTAT-DVARRSSSSSSYQGENEE--KRSGRNFQ 414
            ||       :...:.|.:::.::.:.:.:...:|.| |:..::.||::....::|  .::.:.:.
  Fly   285 RN-------RASYEKHLERECRRIERRVKVDKTTTTCDICNKTLSSATALKLHKEGIHQNVKPYI 342

  Fly   415 CKQCGKSFKRSSTLSTHLLIHSDTRPYP---------------------------CQYCGKRFHQ 452
            |..|||..|..:.|:.|.|:|:::||:.                           |..|||:...
  Fly   343 CDSCGKQLKTITALNEHKLVHTESRPFECTVCKAGFKNRARLKAHYQIHAEPSFVCNICGKKLQT 407

  Fly   453 KSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLRRHRE 517
            :.....|..:||.|:..||.||...|.:|..|.||:..|||.:|:.|:.|.:||....:.|.|:.
  Fly   408 RRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNANCRSHKL 472

  Fly   518 SRHEEAPPVED 528
            .:|.:....||
  Fly   473 KKHPQEVQQED 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 8/21 (38%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
COG5048 423..>497 CDD:227381 27/100 (27%)
zf-H2C2_2 428..452 CDD:290200 10/50 (20%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
zf-H2C2_2 455..480 CDD:290200 9/24 (38%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..516 CDD:275368 5/16 (31%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871
COG5048 <313..471 CDD:227381 42/157 (27%)
C2H2 Zn finger 314..335 CDD:275368 4/20 (20%)
C2H2 Zn finger 343..363 CDD:275368 8/19 (42%)
C2H2 Zn finger 371..391 CDD:275368 0/19 (0%)
C2H2 Zn finger 398..418 CDD:275368 5/19 (26%)
C2H2 Zn finger 426..446 CDD:275368 8/19 (42%)
zf-H2C2_2 439..463 CDD:290200 11/23 (48%)
C2H2 Zn finger 454..475 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.