DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and CG3407

DIOPT Version :9

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_608809.1 Gene:CG3407 / 33606 FlyBaseID:FBgn0031573 Length:714 Species:Drosophila melanogaster


Alignment Length:498 Identity:113/498 - (22%)
Similarity:173/498 - (34%) Gaps:165/498 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NGRDLPFLYNPLLYSSALLWPQFLLSSATALGTPLTPMTPKSPASVVLGQRDRDFALTPEKEHEL 115
            |.||:.|        .|||.|.   ....|...|.||:..::|.  |......|| |:||     
  Fly   338 NFRDITF--------PALLLPG---EPPPASSEPATPLLKENPH--VGDHMALDF-LSPE----- 383

  Fly   116 QMNNNNENSKQDYQEQDEDMPLNLSTKERITSDDSNRDQYHSSSNNSSRSSSSSEVEQLHPMTSL 180
                     |.|.||:                          :....:.|.:....||     :|
  Fly   384 ---------KADPQEE--------------------------AKLEKTLSKACEPNEQ-----TL 408

  Fly   181 NVTP-----PPLSAVNLKSSSTPQQQRQRSQGNIIWSPASMCERSARREQYGLKMEEQGDEEEHQ 240
            .|.|     ||:..|...:||..|.:|         ||..:.|        ..|:     ||:..
  Fly   409 LVAPPACQTPPIPTVPPANSSIEQLRR---------SPLELSE--------AFKL-----EEDDM 451

  Fly   241 VDPIVRKFKYERRTASISSLQSPISSLSAPASNAVQDLEFEVAQQQLYAHRSAFMAGLTGNNLEL 305
            .|                         |.|||:      ||............|       .:|:
  Fly   452 TD-------------------------SRPASS------FEEGDPDAEEPNECF-------QMEV 478

  Fly   306 LTQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAAAEFGYMRNQHQQPQQQQQQQLHHQ 370
            |...|   :|:.:.:.::....|:..:|..|..||                              
  Fly   479 LDTSL---TEEAENKTRRKHFCDKCNRDFNSYNAL------------------------------ 510

  Fly   371 QQPQQHQHQQQHPDSTATDVARRSSSSSSYQGENEEKRSG-RNFQCKQCGKSFKRSSTLSTHLLI 434
               :.||:......|...|...||..:.|....:|...|| :.|:|.:|...|::...|..|::.
  Fly   511 ---KYHQYTHNQERSHKCDSCERSFYTQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIIS 572

  Fly   435 -HSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPFG 498
             |||.:.:.|::|||.|.::..:..|..|||.||.:.|..|.|.|..||.|::|::.|||.:|:.
  Fly   573 RHSDVKAHMCEFCGKSFSRRYSLVVHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYE 637

  Fly   499 CHLCDQSFQRKVDLRRH---RESRHEEAPPVEDLKPLKMEVSS 538
            |.:|::.|:...||:||   .:......||.|..|..:...|:
  Fly   638 CSICEKKFRVSGDLKRHSRIHDPSRTSQPPAEKAKKKRAAASN 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 6/22 (27%)
C2H2 Zn finger 415..435 CDD:275368 5/20 (25%)
COG5048 423..>497 CDD:227381 27/74 (36%)
zf-H2C2_2 428..452 CDD:290200 10/24 (42%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
zf-H2C2_2 455..480 CDD:290200 10/24 (42%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..516 CDD:275368 7/19 (37%)
CG3407NP_608809.1 COG5048 <494..656 CDD:227381 54/194 (28%)
C2H2 Zn finger 497..517 CDD:275368 7/52 (13%)
zf-H2C2_2 509..534 CDD:290200 8/57 (14%)
C2H2 Zn finger 525..545 CDD:275368 5/19 (26%)
zf-H2C2_2 537..562 CDD:290200 7/24 (29%)
C2H2 Zn finger 555..574 CDD:275371 4/18 (22%)
zf-C2H2 580..602 CDD:278523 6/21 (29%)
C2H2 Zn finger 582..602 CDD:275368 6/19 (32%)
zf-H2C2_2 594..617 CDD:290200 9/22 (41%)
C2H2 Zn finger 610..630 CDD:275368 8/19 (42%)
zf-H2C2_2 622..645 CDD:290200 8/22 (36%)
zf-C2H2 636..658 CDD:278523 7/21 (33%)
C2H2 Zn finger 638..658 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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