DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and CG18262

DIOPT Version :9

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:481 Identity:100/481 - (20%)
Similarity:174/481 - (36%) Gaps:177/481 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 LNVTPPPLSA---VNLKSSSTPQQQRQRSQGNIIWS-PAS------MCERSARREQYGLKMEEQG 234
            :.|.|||..|   .||:.            |.:::| |||      :|::....:.|        
  Fly     2 IKVQPPPDVAGGYHNLRC------------GEVLFSAPASYEVSCLLCDQRLPLDGY-------- 46

  Fly   235 DEEEHQVDPIVRKFKYERRTASISSLQSPISSLSAPASNAVQDLEFE-VAQQQLYAHRSAFMAGL 298
              .||        |:.:..|.|.|||.|             .:||.: :||.         :..:
  Fly    47 --PEH--------FRLKHFTNSSSSLCS-------------NELESDPIAQD---------VVEV 79

  Fly   299 TGNNLELLTQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMN-LVAAAE---------FGYMR 353
            .||  |.|.:.|..::....:::::.:.:..::|..:.|||:.| ||...|         .|..:
  Fly    80 QGN--EELHEELAKEASPDLEEEEEEKEEGSKRQHYQRAAAMKNTLVETREDLLDIELDWTGGEQ 142

  Fly   354 NQHQQPQQQQQ------------------------QQLHHQQQPQQHQHQQQHPDSTATDVARRS 394
            ::|.:..::::                        .:.::.::..|...:.:|.::....:.:.:
  Fly   143 SEHNETHEEEEGESDDDDTKDSNDTKDMLFQCDQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSA 207

  Fly   395 SSSSSYQGE--------NEEK-----RSGRNFQ----------CKQCGKSFKRSSTLSTHLLIHS 436
            |..:|.:.:        |||.     |:.|:.:          |..|||.|.:|..:..|...||
  Fly   208 SERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWKHTGIFCDICGKPFTQSGNMMRHRQRHS 272

  Fly   437 DTRPYPCQYCGKRFHQKSDMKKHTYI----------------------------HTGEKPHKCTV 473
            ..:|:.|..|...|:.:.::..|:..                            ||||:|.||.|
  Fly   273 GIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEV 337

  Fly   474 CLKAFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLRRHR----ESR--------------- 519
            |.|||....:|..|...||..:||.|.:|..:||||..||.|:    |.|               
  Fly   338 CGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSG 402

  Fly   520 --------HEEAPPVEDLKPLKMEVS 537
                    |:.|.....:|||...|:
  Fly   403 GLNAHMRSHDPARVKGAVKPLPQSVT 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 7/31 (23%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
COG5048 423..>497 CDD:227381 25/101 (25%)
zf-H2C2_2 428..452 CDD:290200 7/23 (30%)
C2H2 Zn finger 443..463 CDD:275368 4/47 (9%)
zf-H2C2_2 455..480 CDD:290200 13/52 (25%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..516 CDD:275368 8/16 (50%)
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
COG5048 <256..415 CDD:227381 41/158 (26%)
zf-H2C2_2 263..288 CDD:290200 7/24 (29%)
C2H2 Zn finger 279..327 CDD:275368 4/47 (9%)
zf-H2C2_2 320..342 CDD:290200 10/21 (48%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 9/19 (47%)
zf-C2H2 389..411 CDD:278523 0/21 (0%)
C2H2 Zn finger 391..411 CDD:275368 0/19 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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