DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and B0310.2

DIOPT Version :9

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_508109.1 Gene:B0310.2 / 180403 WormBaseID:WBGene00015138 Length:413 Species:Caenorhabditis elegans


Alignment Length:350 Identity:79/350 - (22%)
Similarity:123/350 - (35%) Gaps:95/350 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NSSRSSSSSEVE----QLHPMTSLNVTPPPLSAVNLKSSSTPQQQRQRSQGNIIWSPASMCERSA 221
            ||..||.|.::|    ::..|.:..|:||..|                |..::...|      |.
 Worm   102 NSLCSSKSLDLEPIEIKVEAMENPVVSPPIFS----------------SDDSVKGMP------SR 144

  Fly   222 RREQYGLKMEEQGDEEEHQVDPIVRKFKYERRTASISSLQSPISSLSAPASNAVQDLEFEVAQQQ 286
            :|.:..|:...|...:|:.|.|......:     .:..:..||     |.|||       ...|:
 Worm   145 KRAKRSLEDTVQMLSKENSVSPPPPSLPF-----VLPQIPVPI-----PFSNA-------ALMQR 192

  Fly   287 LYAH---RSAFMAGLTGNNLELLTQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAAAE 348
            ...|   ..|:        |..:.||      ||..:..:.:.           ||||.:...|.
 Worm   193 WLGHPLTNPAY--------LNAMFQH------QPAPKPSEEQF-----------AALMKITMHAA 232

  Fly   349 FGYMRNQHQQPQQQQQQQLHHQQQPQQHQHQQQHPDSTATDVARRSSSSSSYQGENEEKRSGRNF 413
             .:|:...|.|...     |..:...:........|....:|:...|:....:.|:....:|...
 Worm   233 -NFMKTVPQLPVSN-----HFTESDAEDIKIDVESDEGEIEVSPSPSTGDITENESSSSSTGPMI 291

  Fly   414 QCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTYIHTGEKPHKCTVCLK 476
            . ..||..   ...|.         :|:.|.:  |||||..|..:|||.:||||.:||.|..|.|
 Worm   292 S-PNCGDG---DCALE---------KPFICMHNNCGKRFANKFLLKKHMFIHTGLRPHTCPHCHK 343

  Fly   477 AFSQSSNLITHMRKHTGYKPFGCHL 501
            .|::..||:.|.:.|:   |...||
 Worm   344 KFNRKDNLLRHKKTHS---PTSAHL 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 3/21 (14%)
C2H2 Zn finger 415..435 CDD:275368 3/19 (16%)
COG5048 423..>497 CDD:227381 26/75 (35%)
zf-H2C2_2 428..452 CDD:290200 8/25 (32%)
C2H2 Zn finger 443..463 CDD:275368 10/21 (48%)
zf-H2C2_2 455..480 CDD:290200 13/24 (54%)
C2H2 Zn finger 471..491 CDD:275368 7/19 (37%)
C2H2 Zn finger 499..516 CDD:275368 1/2 (50%)
B0310.2NP_508109.1 C2H2 Zn finger 308..330 CDD:275368 10/21 (48%)
zf-H2C2_2 323..347 CDD:290200 13/23 (57%)
C2H2 Zn finger 338..358 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 60 1.000 Inparanoid score I4014
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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