DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and Gfi1

DIOPT Version :10

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001254550.1 Gene:Gfi1 / 14581 MGIID:103170 Length:489 Species:Mus musculus


Alignment Length:69 Identity:17/69 - (24%)
Similarity:26/69 - (37%) Gaps:18/69 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIP 358
            |.:|..:|:..|::.|.|       ...|.|....|:.|.           |:.|:|..|||.:.
Mouse    28 APMSPSSSSASPQKYLRM-------EPSPFGRVSSALTTE-----------QILSNIKQEYKRMQ 74

  Fly   359 TSEH 362
            ...|
Mouse    75 KRRH 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:395048
C2H2 Zn finger 415..435 CDD:275368
zf-C2H2 441..463 CDD:395048
C2H2 Zn finger 443..463 CDD:275368
zf-H2C2_2 455..480 CDD:463886
C2H2 Zn finger 471..491 CDD:275368
zf-H2C2_2 483..506 CDD:463886
C2H2 Zn finger 499..516 CDD:275368
Gfi1NP_001254550.1 COG5048 <321..483 CDD:227381
C2H2 Zn finger 324..345 CDD:275368
C2H2 Zn finger 353..373 CDD:275368
C2H2 Zn finger 381..401 CDD:275368
C2H2 Zn finger 409..429 CDD:275368
C2H2 Zn finger 437..457 CDD:275368
C2H2 Zn finger 465..484 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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