DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens and gfi1b

DIOPT Version :10

Sequence 1:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001258770.1 Gene:gfi1b / 100151531 ZFINID:ZDB-GENE-091118-129 Length:334 Species:Danio rerio


Alignment Length:332 Identity:135/332 - (40%)
Similarity:162/332 - (48%) Gaps:81/332 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 LKMEEQGDEEEHQVDPIVRK--------FKYERRTASISSLQSPISSLSAPASNAVQDLEFEVAQ 284
            |:.:|....|..||||:.|.        .|.||..      ..||.||  |.........|.:::
Zfish    42 LEPKECKSPERPQVDPVTRPSHRDPYDFIKCEREP------DCPIPSL--PELPTATRRPFYISE 98

  Fly   285 QQL------------YAHRSA---------FMAGLTGNNLELLTQHLKLKSE-QPQQQQQQHRIK 327
            .||            :.|..|         |...|..:...|...|||..:| ||......:   
Zfish    99 PQLAEFPPYYKSSFGWDHGPASYQEFRHMGFSPSLLHHASSLYGAHLKQSAEPQPLDCSTHY--- 160

  Fly   328 DEQQQDNRSAAALMNLVAAAEFG---YMRNQHQQPQQQQ----QQQLHHQQQPQQHQ--HQQQHP 383
              ....|.......:.|.:...|   ::|..|...:..:    ::...|....:||.  |.|:  
Zfish   161 --SPSSNTYHCITCDKVFSTSHGLEVHVRRSHSGTRPFECSICRKSFGHAVSLEQHMNVHSQE-- 221

  Fly   384 DSTATDVARRSSSSSSYQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQYCGK 448
                                       |:|:||.|||:|||||||||||||||||||||||||||
Zfish   222 ---------------------------RSFECKMCGKTFKRSSTLSTHLLIHSDTRPYPCQYCGK 259

  Fly   449 RFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLR 513
            |||||||||||||||||||||||.||.||||||||||||.|||||:|||||.:|.:.||||||||
Zfish   260 RFHQKSDMKKHTYIHTGEKPHKCQVCCKAFSQSSNLITHSRKHTGFKPFGCEICSKGFQRKVDLR 324

  Fly   514 RHRESRH 520
            ||.||:|
Zfish   325 RHHESQH 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 18/21 (86%)
C2H2 Zn finger 415..435 CDD:275368 17/19 (89%)
zf-C2H2 441..463 CDD:395048 21/21 (100%)
C2H2 Zn finger 443..463 CDD:275368 19/19 (100%)
zf-H2C2_2 455..480 CDD:463886 22/24 (92%)
C2H2 Zn finger 471..491 CDD:275368 16/19 (84%)
zf-H2C2_2 483..506 CDD:463886 16/22 (73%)
C2H2 Zn finger 499..516 CDD:275368 11/16 (69%)
gfi1bNP_001258770.1 COG5048 <126..326 CDD:227381 109/233 (47%)
C2H2 Zn finger 169..190 CDD:275368 3/20 (15%)
C2H2 Zn finger 198..218 CDD:275368 3/19 (16%)
C2H2 Zn finger 226..246 CDD:275368 17/19 (89%)
C2H2 Zn finger 254..274 CDD:275368 19/19 (100%)
zf-H2C2_2 266..291 CDD:463886 22/24 (92%)
C2H2 Zn finger 282..302 CDD:275368 16/19 (84%)
C2H2 Zn finger 310..326 CDD:275368 10/15 (67%)

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