DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lsp2 and CG7320

DIOPT Version :9

Sequence 1:NP_001287042.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_649034.3 Gene:CG7320 / 40010 FlyBaseID:FBgn0036782 Length:646 Species:Drosophila melanogaster


Alignment Length:739 Identity:170/739 - (23%)
Similarity:299/739 - (40%) Gaps:175/739 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LATLGQAKHLD---SKVADKDFLMKQKFMYQILQHIYQDDVFTTPFGGSYVEYKPW-----EHVA 71
            |:.||...||:   :.:|::.||.||:|:.:||.|:.:.           :..:.|     :.|.
  Fly     7 LSLLGLNIHLEVLANGIANRYFLEKQRFLLEILHHVNEP-----------LMNEQWRLLGKQLVT 60

  Fly    72 D----YVHPEMLEHFFELWQ-----HQPFTDDMVWSVMYDKHEEYVVGLVRLFYFAKNWETFQHV 127
            |    .|:.|.:..|:|.:.     |:    ::.::.:|..|...::||.:.||.|::|.|....
  Fly    61 DKEQYVVYNEQMTRFYEDFSLGKLLHR----NVRYNPLYADHYRQMLGLYQFFYNARDWYTLWQN 121

  Fly   128 VYWARQHVNKQLFVYAVTIASLFRDDMQGVVLPAHYEIHPWSYFDSQALEWAEHYKMHGFHHVKQ 192
            :.|||.||:..:||.|:|...|.|:|.|.:::|..||:.|.||.|...:..|.::....:.....
  Fly   122 ISWARVHVHPCIFVQALTQLILKREDYQALIMPKIYELWPESYHDDVTVRKARNFNFANWIRYVN 186

  Fly   193 MDNIYNV----VIRTNY-SNVHGSLNY-----------------DHDLAYYLEDVGFNAFYYYFN 235
            |.::..:    :...|. .|:.|::.:                 .:.|.:.|||:.:.:::|..|
  Fly   187 MTDVEEIHPQKLEPLNLEGNLRGTIEWFQAMADVNILRMNEQKKRNKLEHLLEDIDWQSYWYNLN 251

  Fly   236 LDYPFWTKGGEEHVLNKDRRGELYLYVHWQLLARWYLERLSHDLGEVPAFNMYVPTESGYASNLR 300
            :......:       |.|:..|...|...|:|||:.||                           
  Fly   252 MGVILTAE-------NSDQLREWCYYQLSQILARYKLE--------------------------- 282

  Fly   301 TYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMDWIHKNEKFDVETINV------LGNIIQG 359
             .||                       .:|..:|:......||:|...|..:      :|:.|..
  Fly   283 -CYG-----------------------QKMAYKRLTQNRGINEEFQFITKKISELEAKVGDTISF 323

  Fly   360 NADSVDKKFYGSLDKLYRFIVNEGHHYGHG-DESFP--------------GLFMHYDTSMRDPIF 409
            .:..:..   ||     |..:||.:::..| :|.||              .:.:...|.:|...|
  Fly   324 QSIQLTN---GS-----RINLNENNNWLIGLEELFPYDWTQLAVDEVIETNILLDIRTIVRSEDF 380

  Fly   410 YEVYKTIVSHYWHLMETYPEYHKKDYAFEGVHIDAVHMPESLTTYFEHFDSDISNAVNVEPAVEG 474
            |...:.::..|....:.:...::|.:....:.||.:.: ..|.||.:..|.||||.:        
  Fly   381 YYYAERLLDSYRWYRQVFQPNNQKTFIPSDLRIDDMQI-TPLITYDQPVDVDISNIL-------- 436

  Fly   475 SADPLYTFGRNSHYKGSSYVIKARQQRLNHKPFEFTLDVTSDKAQDAVVKVFIGPKYDEHGHEIP 539
            :|...|..|:...    .:.::.||.||.||.|.:.|.::|:|.|..:.:||:  ...|.|..|.
  Fly   437 AAQHFYLAGQFVW----PFTLQHRQFRLQHKDFSYNLLISSNKTQSTIFRVFL--TTSERGGNIQ 495

  Fly   540 LEHNYQNFFELEHFKVHLEAGVNHIKRASGDFSFWVNDRTTYLELYQKLMDATNSDYKFKLDQSE 604
            .|    .|::|:.|...:..|:|.|.|.|.:|.....|..:|.||||.:..|...::.|.|:.|.
  Fly   496 RE----PFYQLDSFLTVIYPGLNRITRESKEFKGLAGDHISYTELYQFVKLAERDEFDFPLNIST 556

  Fly   605 AHCGVPNRMMLPRGKKGGQVFQFFYMVYPYHQPEVAQFTGYDPVVSCGVGHGSRYVDALPFGFPF 669
            |:|..|.|::||||..|..:.....:|...:.....|    :..::|....|....|.||.|:||
  Fly   557 ANCAFPRRLILPRGGLGNPLKLRLLIVASVYDFRARQ----ENELNCDFSQGVSRWDELPLGYPF 617

  Fly   670 NRPVK-----------HDYYFDVH 682
            .|.::           |.::.|||
  Fly   618 ERFLEDDALAVEISGDHVFWKDVH 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp2NP_001287042.1 Hemocyanin_N 33..156 CDD:281684 37/136 (27%)
Hemocyanin_M 163..420 CDD:278784 50/299 (17%)
Hemocyanin_C 430..693 CDD:281685 74/264 (28%)
CG7320NP_649034.3 Hemocyanin_N 28..149 CDD:281684 37/135 (27%)
Hemocyanin_M 157..>282 CDD:278784 25/131 (19%)
Hemocyanin_C 400..644 CDD:281685 74/265 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470641
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28IXN
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D130404at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.