DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp2 and CG8100

DIOPT Version :9

Sequence 1:NP_001287042.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_001261825.1 Gene:CG8100 / 39565 FlyBaseID:FBgn0036410 Length:648 Species:Drosophila melanogaster


Alignment Length:720 Identity:150/720 - (20%)
Similarity:263/720 - (36%) Gaps:217/720 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KHLDSKVADKDFLMKQKFMYQILQHIYQ-------DDVFTTPFGGSYVEYKP-------WEHVAD 72
            |:..|...:.::..:|...|.:|..:.|       :::.|.   ||.:...|       |.::.|
  Fly    26 KYFGSSNVEVNYNQRQDRQYFLLNLLIQVHKPLLHEELITM---GSQLNDDPDSYKEGTWRYIKD 87

  Fly    73 Y---VHPEMLEHFFELWQHQPFTDDMVWSVMYDKHEEY---VVGLVRLFYFAKNWETFQHVVYWA 131
            :   ||...:.        .||.      ::....||.   ::|:.|....|.:|.:||....:|
  Fly    88 FRERVHQNRVP--------GPFV------ILNQLDEEMPLNLLGIYRFLTMAVDWTSFQRNACFA 138

  Fly   132 RQHVNKQLFVYAVTIASLFRDDMQGVVLPAHYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNI 196
            |.|.:..|||.|:.:|...|:|.:.:.:||.||:.|..||:.:.:..|:....:      |:..|
  Fly   139 RIHFHPLLFVNALQMAVEEREDTKDLRMPAMYEVLPQLYFEKEVILTAQEVTWN------QLSPI 197

  Fly   197 YNVVIRTNYSNVHGSLNYDHDLAYYLED--------VGFNA-FYYYFNLDYPF---WT------- 242
            ..|..:..:.::  .|.|.:....::|:        :..|| ...|.:||...   |.       
  Fly   198 RLVTPKRRWIDI--LLGYRNPKQPWMEEEPIPTDPLIIDNARKVAYLSLDLELNSHWNSLITRLI 260

  Fly   243 --------KGGEEHVLNKDR----RG--------------------ELYLYVHWQLLARWYLERL 275
                    |..|..:::.||    ||                    :||||...|.:|...:|.|
  Fly   261 ISIEEGKEKTNEPIIIDGDRLVAFRGSFDEVNFKKHLALGSHFHNTKLYLYNLHQFVAALSMEDL 325

  Fly   276 SHDLGEVPAFNMYVPTESGYASNLRTYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMDWI- 339
            :  .|:.....:|.|        |.|..|||           ::....:||.|.......:|.: 
  Fly   326 A--TGQKSTELIYPP--------LMTTGGVP-----------YKGTSLNIEAVRGIIDLTIDGLK 369

  Fly   340 --------HKNEKFDVETINVLGNIIQGNADSVDKKFYGSLDKLYRFIVNEGHHYGHGDESFPGL 396
                    |.|...|  .:::.|.||..|        |..:.:.....||     |.|... |.:
  Fly   370 DKIEMAVKHNNHAMD--NLSIAGGIIGNN--------YLHICRQLNLAVN-----GQGINQ-PSM 418

  Fly   397 FMHYDTSMRDPIFYEVYKTIVSHYWHLMETYPEYHKKDYAFEGVHIDA--------VHMPES-LT 452
            .....:::||||    |::::...:.|:        |.|..|.:..|.        |.:..| |.
  Fly   419 LGSATSNLRDPI----YRSLLFRIYDLL--------KSYENENIFPDVGGRETPKIVDIQVSRLV 471

  Fly   453 TYFEHFDSDISNAVNVEPAVEGSADPLYTFGRNSHYKGSSYV---IKARQQRLNHKPFEFTLDVT 514
            |:.|...:|:.|.::.:..:             ||.....::   :.|||.||||.||...||:.
  Fly   472 TFEETMTTDLINLIDQQLLL-------------SHRNNLQFLRRNLVARQHRLNHDPFSIGLDIV 523

  Fly   515 SDKAQDAVVKVFIGPKYDEHGHEIPLEHNYQNFFELEHFKVHLEAGVNHIKRASGDFSFWVNDRT 579
            :.:......::::.           |.:..:....|:.||..|:.|:||.:|   .|...:: :.
  Fly   524 APENLVVEARMYLS-----------LPNQLRLRLHLDSFKCSLKRGLNHFER---QFPTAIS-KP 573

  Fly   580 TYLELYQ---KLMDATNSDYKFKLDQSEAHCGVPNRMMLPRGKKGGQVFQFFYMVYPYHQPEVAQ 641
            |..|||:   ...|.|.|: :|           |..:.||||...|...|...        |:::
  Fly   574 TLSELYEADYASTDVTTSN-RF-----------PPHLQLPRGTGDGLKLQLLV--------ELSE 618

  Fly   642 FTGYD 646
            :.|.:
  Fly   619 WNGLE 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp2NP_001287042.1 Hemocyanin_N 33..156 CDD:281684 32/142 (23%)
Hemocyanin_M 163..420 CDD:278784 62/316 (20%)
Hemocyanin_C 430..693 CDD:281685 51/232 (22%)
CG8100NP_001261825.1 Hemocyanin_N 41..163 CDD:281684 32/138 (23%)
Hemocyanin_C 444..>621 CDD:281685 49/224 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470645
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28IXN
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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