DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp2 and PPO1

DIOPT Version :9

Sequence 1:NP_001287042.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_476812.1 Gene:PPO1 / 37044 FlyBaseID:FBgn0283437 Length:690 Species:Drosophila melanogaster


Alignment Length:674 Identity:183/674 - (27%)
Similarity:289/674 - (42%) Gaps:148/674 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 WSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVVLPA 161
            :|:..::|.|....|:.||..|.|...|..:..:.:..||..||.||..:|...|.|.:.|.:..
  Fly    84 FSLFNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVAHRPDTREVPITN 148

  Fly   162 HYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNIYNVVIRTNYSNVHGSL--NY-------DHD 217
            ..:|.|.::.:..|           |...:|..:    ||..:.:.||..:  ||       :..
  Fly   149 ISQIFPSNFVEPSA-----------FRDARQEAS----VIGESGARVHVDIPQNYTASDREDEQR 198

  Fly   218 LAYYLEDVGFNAFYYYFNLDYPFWTKGGEEHVLNKDRRGELYLYVHWQLLARWYLERLSHDLGEV 282
            |||:.||:|.|:.:::::|.||  |.|..| |:||||||||:.|:|.|:|||:.:||..::|.:|
  Fly   199 LAYFREDIGVNSHHWHWHLVYP--TTGPTE-VVNKDRRGELFYYMHHQILARYNVERFCNNLKKV 260

  Fly   283 -PAFNMYVPTESGY------ASNLRTYYGVPQWHRENHHSF----YHEHNYEHIEHVEMYTQRVM 336
             |..|:.|....||      ::|.|||..     |..:...    .|:...| |..||.:..||:
  Fly   261 QPLNNLRVEVPEGYFPKILSSTNNRTYPA-----RVTNQKLRDVDRHDGRVE-ISDVERWRDRVL 319

  Fly   337 DWIHKNEKFD----------VETINVLGNIIQGN-ADSVDKKFYGSLDKLYRFIVNEGHH----- 385
            ..|.:....|          |..|::|||:|:.: ..|::..|||:|.       ||||:     
  Fly   320 AAIDQGYVEDSSGNRIPLDEVRGIDILGNMIEASPVLSINYNFYGNLH-------NEGHNIISFA 377

  Fly   386 ----YGHGDESFPGLFMHYDTSMRDPIFYEVYKTIVSHYWH-LMET--------YPEYHKKDYAF 437
                |.|.:|.  |:.....|:|||||||.         || .::|        ...|:..:..|
  Fly   378 HDPDYRHLEEF--GVMGDVTTAMRDPIFYR---------WHGFIDTVFNKFKTRLNPYNAGELNF 431

  Fly   438 EGVHIDAVH--------MPESLTTYFEHFDSDISNAVNVEPAVEGSADPLYTFGRNSHYKGSSYV 494
            :|:.:|.:.        ...:|.||::...:|::..::..|          |..||         
  Fly   432 DGITVDYIEAKIGKSNTKANTLLTYWQKSSADLAAGLDFGP----------TTDRN--------- 477

  Fly   495 IKARQQRLNHKPFEFTLDVTSDKA-QDAVVKVFIGPKYDEHGHEIPLEHNYQNFFELEHFKVHLE 558
            |.|....|.:.||.:|.:||::.| :....::||.||.||....:.||.......|::.|.|.|.
  Fly   478 IFASFTHLQNAPFTYTFNVTNNGARRTGTCRIFICPKVDERNQALNLEEQRLLAIEMDKFTVDLV 542

  Fly   559 AGVNHIKRASGDFSFWVNDRTTYLELYQKLMDATNSDYKFKLDQSEAH-----CGVPNRMMLPRG 618
            .|.|.|:|.|.:.|..:.        :::......:||:.|.....|.     ||.|..::||:|
  Fly   543 PGENTIRRQSTESSVAIP--------FERSFRPVGADYQPKAADELARFKFCGCGWPQHLLLPKG 599

  Fly   619 KKGGQVFQFFYMVYPYHQPEVAQ--------FTGYDPVVSCGVGHGSRYVDALPFGFPFNRPVKH 675
            ...|.||..|.|:..|.|..|.|        .|.|.   .||: ....|.|....|:||:|.:.:
  Fly   600 NAQGMVFDLFVMISDYSQDSVEQPKTPNDACSTAYS---FCGL-KDKLYPDRRTMGYPFDRRLPN 660

  Fly   676 DYYFDV----HNFKFVDVKIFHRD 695
            ....::    .|....|::|...|
  Fly   661 ANLTELVGAFGNMAKTDLRIVFND 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp2NP_001287042.1 Hemocyanin_N 33..156 CDD:281684 18/58 (31%)
Hemocyanin_M 163..420 CDD:278784 89/296 (30%)
Hemocyanin_C 430..693 CDD:281685 71/288 (25%)
PPO1NP_476812.1 Hemocyanin_N 27..142 CDD:281684 18/57 (32%)
Hemocyanin_M 152..414 CDD:278784 92/303 (30%)
Hemocyanin_C 423..682 CDD:281685 71/289 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470654
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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