DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp2 and PPO1

DIOPT Version :10

Sequence 1:NP_524816.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_476812.1 Gene:PPO1 / 37044 FlyBaseID:FBgn0283437 Length:690 Species:Drosophila melanogaster


Alignment Length:674 Identity:183/674 - (27%)
Similarity:289/674 - (42%) Gaps:148/674 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 WSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVVLPA 161
            :|:..::|.|....|:.||..|.|...|..:..:.:..||..||.||..:|...|.|.:.|.:..
  Fly    84 FSLFNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVAHRPDTR
EVPITN 148

  Fly   162 HYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNIYNVVIRTNYSNVHGSL--NY-------DHD 217
            ..:|.|.::.:..|           |...:|..:    ||..:.:.||..:  ||       :..
  Fly   149 ISQIFPSNFVEPSA-----------FRDARQEAS----VIGESGARVHVDIPQNYTASDREDEQR 198

  Fly   218 LAYYLEDVGFNAFYYYFNLDYPFWTKGGEEHVLNKDRRGELYLYVHWQLLARWYLERLSHDLGEV 282
            |||:.||:|.|:.:::::|.||  |.|..| |:||||||||:.|:|.|:|||:.:||..::|.:|
  Fly   199 LAYFREDIGVNSHHWHWHLVYP--TTGPTE-VVNKDRRGELFYYMHHQILARYNVERFCNNLKKV 260

  Fly   283 -PAFNMYVPTESGY------ASNLRTYYGVPQWHRENHHSF----YHEHNYEHIEHVEMYTQRVM 336
             |..|:.|....||      ::|.|||..     |..:...    .|:...| |..||.:..||:
  Fly   261 QPLNNLRVEVPEGYFPKILSSTNNRTYPA-----RVTNQKLRDVDRHDGRVE-ISDVERWRDRVL 319

  Fly   337 DWIHKNEKFD----------VETINVLGNIIQGN-ADSVDKKFYGSLDKLYRFIVNEGHH----- 385
            ..|.:....|          |..|::|||:|:.: ..|::..|||:|.       ||||:     
  Fly   320 AAIDQGYVEDSSGNRIPLDEVRGIDILGNMIEASPVLSINYNFYGNLH-------NEGHNIISFA 377

  Fly   386 ----YGHGDESFPGLFMHYDTSMRDPIFYEVYKTIVSHYWH-LMET--------YPEYHKKDYAF 437
                |.|.:|.  |:.....|:|||||||.         || .::|        ...|:..:..|
  Fly   378 HDPDYRHLEEF--GVMGDVTTAMRDPIFYR---------WHGFIDTVFNKFKTRLNPYNAGELNF 431

  Fly   438 EGVHIDAVH--------MPESLTTYFEHFDSDISNAVNVEPAVEGSADPLYTFGRNSHYKGSSYV 494
            :|:.:|.:.        ...:|.||::...:|::..::..|          |..||         
  Fly   432 DGITVDYIEAKIGKSNTKANTLLTYWQKSSADLAAGLDFGP----------TTDRN--------- 477

  Fly   495 IKARQQRLNHKPFEFTLDVTSDKA-QDAVVKVFIGPKYDEHGHEIPLEHNYQNFFELEHFKVHLE 558
            |.|....|.:.||.:|.:||::.| :....::||.||.||....:.||.......|::.|.|.|.
  Fly   478 IFASFTHLQNAPFTYTFNVTNNGARRTGTCRIFICPKVDERNQALNLEEQRLLAIEMDKFTVDLV 542

  Fly   559 AGVNHIKRASGDFSFWVNDRTTYLELYQKLMDATNSDYKFKLDQSEAH-----CGVPNRMMLPRG 618
            .|.|.|:|.|.:.|..:.        :::......:||:.|.....|.     ||.|..::||:|
  Fly   543 PGENTIRRQSTESSVAIP--------FERSFRPVGADYQPKAADELARFKFCGCGWPQHLLLPKG 599

  Fly   619 KKGGQVFQFFYMVYPYHQPEVAQ--------FTGYDPVVSCGVGHGSRYVDALPFGFPFNRPVKH 675
            ...|.||..|.|:..|.|..|.|        .|.|.   .||: ....|.|....|:||:|.:.:
  Fly   600 NAQGMVFDLFVMISDYSQDSVEQPKTPNDACSTAYS---FCGL-KDKLYPDRRTMGYPFDRRLPN 660

  Fly   676 DYYFDV----HNFKFVDVKIFHRD 695
            ....::    .|....|::|...|
  Fly   661 ANLTELVGAFGNMAKTDLRIVFND 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp2NP_524816.1 Hemocyanin_N 33..156 CDD:461025 18/58 (31%)
Hemocyanin_M 161..420 CDD:459787 89/298 (30%)
Hemocyanin_C 429..692 CDD:461026 70/288 (24%)
PPO1NP_476812.1 Hemocyanin_N 27..142 CDD:461025 18/57 (32%)
Hemocyanin_M 149..414 CDD:459787 92/306 (30%)
Hemocyanin_C 423..681 CDD:461026 70/288 (24%)

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