DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp2 and PPO2

DIOPT Version :10

Sequence 1:NP_524816.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_610443.1 Gene:PPO2 / 35910 FlyBaseID:FBgn0033367 Length:684 Species:Drosophila melanogaster


Alignment Length:648 Identity:181/648 - (27%)
Similarity:278/648 - (42%) Gaps:94/648 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DMVWSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVV 158
            |..:|:...||......|:.:|...::.:..|.|..:||..||..||.||:::|.|.|.|.||:.
  Fly    78 DEQFSLFLPKHRRIAGRLIDIFMNMRSVDDLQSVAVYARDRVNPVLFNYALSVALLHRPDTQGLD 142

  Fly   159 LPAHYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNIYNVVIRTNYSNVHGSLNYDHDLAYYLE 223
            ||:..:..|..:.|||.:.     ||.....|.|..:...:.|..:|:  ...|:.:|.|.|:.|
  Fly   143 LPSFSQTFPDRFIDSQVIR-----KMREESFVVQPGSRMPITIPRDYT--ASDLDPEHRLWYFRE 200

  Fly   224 DVGFNAFYYYFNLDYPFWTKGGEEHVLNKDRRGELYLYVHWQLLARWYLERLSHDLGEV-PAFNM 287
            |:|.|..:::::|.|||  :..:..::.|||||||:.|:|.|::||:..||.|::|..| |..|:
  Fly   201 DLGINLHHWHWHLVYPF--EASDRSIVAKDRRGELFYYMHQQVIARYNAERFSNNLARVLPFNNL 263

  Fly   288 YVPTESGYASNLRTYYGVPQWHRENHHSFYHEHNYE------HIEHVEMYTQRVMDWIHKNEKFD 346
            ..|...||...:.:......|......:...:.|.|      .|..:|.:..|:.:.||:....|
  Fly   264 RDPIAEGYFPKMDSLVASRAWPPRFESTRLSDLNRESDQLNVEIGDLERWRDRIYEAIHQGFVMD 328

  Fly   347 ----------VETINVLGNIIQGNADSVDKKFYGSLDKLYRFIVNEGH---HYGHGD-----ESF 393
                      ...|:.|||:|:.:..|.::..||.|.       |.||   .|.|..     |||
  Fly   329 ERGNRVPLDEATGIDTLGNMIESSILSPNRVLYGDLH-------NNGHTFISYAHDPTSKHLESF 386

  Fly   394 PGLFMHYDTSMRDPIFYEVYKTIVSHYWHLMETYPEYHKKDYAFEGVHIDAVHM------PESLT 452
             |:.....|:||||:||:.:..|...:.......|.|.:....:.||.|..:.:      |.:||
  Fly   387 -GVMGDVSTAMRDPVFYKWHSYIDRIFQEHKSRLPAYTENQLNYPGVSIAGIQVDTNGGRPNNLT 450

  Fly   453 TYFEHFDSDISNAVNVEPAVEGSADPLYTFGRNSHYKGSSYVIKARQQRLNHKPFEFTLDVTSDK 517
            |:::..|.|:|...:..|                  :|:.:   ||...|.|.||.:|:.:.:|.
  Fly   451 TFWQQSDVDMSRGFDFLP------------------RGNVF---ARFTHLQHLPFTYTISLNNDS 494

  Fly   518 AQD--AVVKVFIGPKYDEHGHEIPLEHNYQNFFELEHFKVHLEAGVNHIKRASGDFSFWVNDRTT 580
            ...  ..|::|:.||.||.|..:.:........||:.|...|..|.|.|:|.|.:.|..:....|
  Fly   495 GAQRFGYVRIFMAPKNDERGQPMLMRDQRSMMIELDKFVTSLNPGPNTIRRRSTESSVTIPFERT 559

  Fly   581 YLELYQKLMDA------TNSDYKFKLDQSEAHCGVPNRMMLPRGKKGGQVFQFFYMVYPYHQPEV 639
            :..|     ||      |..:.:|..    ..||.||.|::|:|...|.....|.||..|....:
  Fly   560 FRNL-----DANRPAAGTPEELEFNF----CGCGWPNHMLVPKGLPEGLQCVLFIMVSNYENDRI 615

  Fly   640 -AQFTG--YDPVVSCGVGHGSRYVDALPFGFPFNR----PVKHDYYFDVHNFKFVDVKIFHRD 695
             .|..|  .|....||| ....|.|....||||:|    .|.....|...|...|||.|.|.:
  Fly   616 DQQLVGRCSDAASYCGV-RDRLYPDRQSMGFPFDRLPRSGVDRLVNFLTPNMSIVDVNIRHEN 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp2NP_524816.1 Hemocyanin_N 33..156 CDD:461025 20/61 (33%)
Hemocyanin_M 161..420 CDD:459787 79/283 (28%)
Hemocyanin_C 429..692 CDD:461026 75/283 (27%)
PPO2NP_610443.1 Hemocyanin_N 19..140 CDD:461025 20/61 (33%)
Hemocyanin_M 150..412 CDD:459787 79/278 (28%)
Hemocyanin_C 421..674 CDD:461026 75/283 (27%)

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