DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp2 and Lsp1alpha

DIOPT Version :10

Sequence 1:NP_524816.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_511138.2 Gene:Lsp1alpha / 32199 FlyBaseID:FBgn0002562 Length:816 Species:Drosophila melanogaster


Alignment Length:818 Identity:273/818 - (33%)
Similarity:406/818 - (49%) Gaps:145/818 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FTVIALAAVALLATLGQAKHLDSKVADKDFLMKQKFMYQILQHIYQDDVFTTPFGGSYVEYKPWE 68
            |.:..||.||::......|..|.|||||.|||||||:::|:..:....:|..........|...|
  Fly     3 FAIAFLACVAVVTATAYHKTHDIKVADKAFLMKQKFLFEIVYRVEDPLMFEEYIAMGKQFYFDKE 67

  Fly    69 HVADYVHPEM-LEHFFELWQ-HQPFTDDMVWSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWA 131
            |   |.|.:: :|.|||..: |........:..:...|.:...||...||:||:||||...|.:|
  Fly    68 H---YTHFDLYMEKFFEAHKAHALLPKGEFFGALVKHHAKQARGLFNFFYYAKDWETFMTNVAFA 129

  Fly   132 RQHVNKQLFVYAVTIASLFRDDMQGVVLPAHYEIHPWSYFDSQALEWAE--HYKM---------- 184
            |.|.|:.:||||:|:|.:.|||..|:||||.:||.|..:|:|:.:..||  .|:|          
  Fly   130 RMHFNEGMFVYALTLAVIHRDDFHGLVLPAIHEIFPQFFFNSKFVMEAEKFDYEMWMKTSLYEKE 194

  Fly   185 ---------------HGF-------------------HHVKQM----DNIY-------------- 197
                           ||:                   |....|    |.:|              
  Fly   195 YMDVYHKIPTFSSYEHGYKQGMAYGYGKTHGHGQTYEHEFGSMYQTSDYMYMKDFKTWQWWKLMG 259

  Fly   198 ---------NVVIRTN-------------------------YSNVHGSLNYDHDLAYYLEDVGFN 228
                     |.::|.|                         ||......|.:..|:|:.||:|:|
  Fly   260 LGEHWYSESNYILRENIYEYNQESNWLTMMKDVKKFYMPVDYSRDLYLYNEESKLSYFTEDLGWN 324

  Fly   229 AFYYYFNLDYPFWTKGGEEHVLNKDRRGELYLYVHWQLLARWYLERLSHDLGEVPAFNMYVPTES 293
            :::||.|:||.|:. .|:...|..|||||.:||...|||:|:::|||||.|||:|.|:.:...|.
  Fly   325 SYWYYLNMDYSFFL-DGKTFGLQNDRRGEWWLYNVHQLLSRYHMERLSHGLGEIPQFSWFHQIEM 388

  Fly   294 GYASNLRTYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMDWI----------HKNEKFDVE 348
            ||...|..|.|:...:|:|::......|:|.::.:..:.||:.:.:          |..:....|
  Fly   389 GYDPQLIYYNGIGYSYRKNYYELETYGNFEMLDKITGFQQRIQNIVELGYYQTTDGHMIDLRKPE 453

  Fly   349 TINVLGNIIQGNADSVDKKFYGSLDKLYRFIVNEGHHYGHGDESFPGLFMHYDTSMRDPIFYEVY 413
            :|.::||::|||.|::|..|:.....|......:.|:|..  |.:|.:.::::|.||||:||..|
  Fly   454 SIEIIGNMLQGNVDAIDNIFFQFWYMLAHMYFADTHYYQM--EVYPNVMLNFETMMRDPMFYMFY 516

  Fly   414 KTIVSHYWHLMETYPEYHKKDYAFEGVHIDAVHMPESLTTYFEHFDSDISNAVNVEPAVEGSADP 478
            |:|...|:..|...|:|.|:.....||.:..|.:.| |.|||:..|.|::|.:|           
  Fly   517 KSIAQVYFQFMHHLPKYTKEQLLMPGVTLKHVEVSE-LVTYFDLVDFDVTNMLN----------- 569

  Fly   479 LYTFGRNSHYKGSSYVIK---ARQQRLNHKPFEFTLDVTSDKAQDAVVKVFIGPKYDEHGHEIPL 540
                |:...::|.....|   |||.|||||||.:|..:.|.:.:..|::.|:|||:||:|..|.|
  Fly   570 ----GKMVFHEGQFLWDKSLFARQMRLNHKPFSYTYTIDSARDEKVVIRAFLGPKFDEYGRMISL 630

  Fly   541 EHNYQNFFELEHFKVHLEAGVNHIKRASGDFSFWVNDRTTYLELYQKLMDATNSDYKFKLDQSEA 605
            ..|..||.|::.|...|:.|.|.|.|.|.||::.|.|||||.|||...|.|.:..|.:.||.:|.
  Fly   631 TDNRMNFMEIDEFTYTLKTGSNLITRKSTDFAWTVKDRTTYTELYYYTMMAFDGKYDYPLDLTEP 695

  Fly   606 HCGVPNRMMLPRGKKGGQVFQFFYMVYPYHQPEVAQFTGYDPVVSCGVGHGSRYVDALPFGFPFN 670
            |||.|:|::||.|.|.|...|.|:||.||..|:..||:.:|...|||:|.|:|:||:||||:||:
  Fly   696 HCGFPDRLVLPMGWKKGMPMQMFFMVVPYMAPQHEQFSTFDYTYSCGIGSGARHVDSLPFGYPFD 760

  Fly   671 RPVKHDYYFDVHNFKFVDVKIFHRD---------EHTN 699
            |.: ::|.|.|.|..|.||.|:|.|         |:||
  Fly   761 REI-NEYEFHVPNMYFKDVTIYHADTMEKYYNYKEYTN 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp2NP_524816.1 Hemocyanin_N 33..156 CDD:461025 44/124 (35%)
Hemocyanin_M 161..420 CDD:459787 95/366 (26%)
Hemocyanin_C 429..692 CDD:461026 109/265 (41%)
Lsp1alphaNP_511138.2 Hemocyanin_N 32..154 CDD:461025 44/124 (35%)
Hemocyanin_M 287..523 CDD:459787 76/238 (32%)
Hemocyanin_C 532..781 CDD:461026 109/265 (41%)

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