Sequence 1: | NP_524815.1 | Gene: | lin / 45325 | FlyBaseID: | FBgn0002552 | Length: | 858 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021333377.1 | Gene: | lins1 / 798262 | ZFINID: | ZDB-GENE-101019-1 | Length: | 604 | Species: | Danio rerio |
Alignment Length: | 844 | Identity: | 150/844 - (17%) |
---|---|---|---|
Similarity: | 267/844 - (31%) | Gaps: | 363/844 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 120 DTDLHSQPESAHDEVDRAAKLPNLLTLDTTNGNGSHASSRSNCLQATTATSIDDMLEFEQSLTRQ 184
Fly 185 CLCGVSERTLRKPFQSHYSQDTNGQKRIAYLREWPTNKLLQFLSNLQLLFDIYLKQNAKGFICTR 249
Fly 250 IMDVCDALIR--NDHKLIDEIIVLAGYENSYVQFLAGRVLAAFLVIAKQELNDEWLQK------- 305
Fly 306 --IVDQLFNFEQLDQ-----AAVQKIHFSLD-------IIKRIVEWKDMEIHPLDDDWMASANST 356
Fly 357 SAASSVVPLSTEASVSYMHFPVQEQPLATNYFALQFREDTEGERETGQEAPDNRDRHRRHFGEDM 421
Fly 422 NVAYEPHPAPQSTTMPSGCHVVTLTDSESFDTTHLKCITIQKLEHKWPTLVKNMSELMAPTHQDA 486
Fly 487 AEHCVLNFLQLWE--NIISVKANLSIDETRPYYAQLDKFELLLSHSLSCTVYKQMLCLFNEALC- 548
Fly 549 -YGSTLALQDM---------LPEETCKLAHQIVCHVR-GFRILESLPRRQPDNMVSLIGYNGKPM 602
Fly 603 VYANGTITLAHAAQSGDSEEDGAPLDLIEMDKTLLQKMVLLVLKSIAVTVKEIRSDSSDSSIDST 667
Fly 668 DYDAFQDMMLIERSIRDVLSKLETFIKQ--TLEFHPECHFSKILIHLFDDQDDHLIEAMVCTLDV 730
Fly 731 ---------TSGISFRNNAFPELVAMLNPVYTFLEFLKMTSNSSDLLLDLLVSNETCFLLYLLRL 786
Fly 787 LKYIRMNWTMFVHS-----------------------------CHTFGMGS-------------- 808
Fly 809 ----------------------AMLDEAMGVLIRLRLQISRLVSRQLYPYDISPVLRLLESCES 850 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lin | NP_524815.1 | LINES_N | 442..801 | CDD:291366 | 83/412 (20%) |
LINES_C | 814..849 | CDD:291367 | 14/34 (41%) | ||
lins1 | XP_021333377.1 | LINES_N | 150..477 | CDD:317138 | 94/507 (19%) |
LINES_C | 562..597 | CDD:317139 | 14/34 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170580219 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_2CN0S | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007032 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR16057 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.930 |