Sequence 1: | NP_524815.1 | Gene: | lin / 45325 | FlyBaseID: | FBgn0002552 | Length: | 858 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_690028.2 | Gene: | Lins1 / 72635 | MGIID: | 1919885 | Length: | 764 | Species: | Mus musculus |
Alignment Length: | 373 | Identity: | 83/373 - (22%) |
---|---|---|---|
Similarity: | 158/373 - (42%) | Gaps: | 77/373 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 473 KNMSELMAPTHQDAAEHCVLNFLQLWENIISVKANLSID--ETRPYYAQLDKFELL-------LS 528
Fly 529 HSLSCTVYKQMLCLFNEALC---YGSTLALQDMLPEETCKLAHQIV--CHVRGFRILESLPRRQP 588
Fly 589 DNMVSLIGYNGKPMVYANGTITLAHAAQSGDSEEDGAPLDLIEMDKTLLQKMVLLVLKSIAVTVK 653
Fly 654 EIRSDSSDSSIDSTDYDAFQDMMLIERSIRDVLSKLETFIKQTLEFHPECHFSKILIHLFDDQDD 718
Fly 719 HLIEAMVCTLDVTSGISFRNNAFPELVAM------------LNPVYTFLEFLKMTSNSSDLLLDL 771
Fly 772 LVSNETCFLLYLLRLLKYIRMNWTMFVHSCHTFGMGSAMLDEAMGVLI 819 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lin | NP_524815.1 | LINES_N | 442..801 | CDD:291366 | 78/353 (22%) |
LINES_C | 814..849 | CDD:291367 | 2/6 (33%) | ||
Lins1 | NP_690028.2 | LINES_N | 211..558 | CDD:291366 | 78/353 (22%) |
LINES_C | 723..758 | CDD:291367 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167836731 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_2CN0S | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007032 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR16057 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.890 |