Sequence 1: | NP_524815.1 | Gene: | lin / 45325 | FlyBaseID: | FBgn0002552 | Length: | 858 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002939313.3 | Gene: | lins1 / 100486288 | XenbaseID: | XB-GENE-957262 | Length: | 721 | Species: | Xenopus tropicalis |
Alignment Length: | 450 | Identity: | 97/450 - (21%) |
---|---|---|---|
Similarity: | 171/450 - (38%) | Gaps: | 140/450 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 434 TTMPS----GCHVVTLTDSESFDTTHLKCITIQKLEHKWPTLVKNMSELMA---PTH-----QDA 486
Fly 487 AEHCVLNFLQLWENIISVKANLSIDETRPYYAQLDKFELLLSHSLSCTVYKQMLCLFNEALCYGS 551
Fly 552 TLALQDMLPEETCKLAHQIVCHVRGFRILESLPRRQPDNMVSLIGYNGKPMVYANGTITLAHAAQ 616
Fly 617 SGDSEEDGAPLDLIEMDKTLLQKMVLLVLKSI------AVTVKEIRSD------SSDSSIDSTDY 669
Fly 670 DAF-------QDMMLIERSIRDVLS-KLETFIKQTLEF-----------HPECHFSKILIHLFDD 715
Fly 716 QDDHLIEAM------------------VCT-----LDVTSGISFRNNAFPELVAMLNPVYTFLEF 757
Fly 758 LKMTSNSSDLLLDLLVSNETCFLLYLLRLLKYIRMNWTMFVHSCHTFGMGSAMLDEAMGV 817 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lin | NP_524815.1 | LINES_N | 442..801 | CDD:291366 | 89/420 (21%) |
LINES_C | 814..849 | CDD:291367 | 1/3 (33%) | ||
lins1 | XP_002939313.3 | LINES_N | 168..520 | CDD:405394 | 90/425 (21%) |
LINES_C | 676..707 | CDD:405395 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007032 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR16057 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.100 |