DRSC/TRiP Functional Genomics Resources

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Protein Alignment trol and CNTN2

DIOPT Version :10

Sequence 1:NP_001401049.1 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4489 Species:Drosophila melanogaster
Sequence 2:XP_047285058.1 Gene:CNTN2 / 6900 HGNCID:2172 Length:1187 Species:Homo sapiens


Alignment Length:1231 Identity:267/1231 - (21%)
Similarity:399/1231 - (32%) Gaps:398/1231 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  2650 CRCKA------RWK----------GDRCREIDTN----DPTDIGTEDPVLTQIIVSIQKPEITIV 2694
            ||.:|      |||          |.|.:.:..|    :||.  .:|..:.|.:.|  .|..|:|
Human    61 CRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTK--AQDAGVYQCLAS--NPVGTVV 121

  Fly  2695 --------------------PV----GGSMTLSCSG-------RMRWSNSPVIVNWYKENSRLPE 2728
                                ||    |..:.|.|:.       ..||     ::|      ..|.
Human   122 SREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRW-----LLN------EFPN 175

  Fly  2729 NVEVQG--------GNLYLYDLQVSDSGVYICQAVNN---ETASVFKDTVSITI----TR-YAQE 2777
            .:...|        ||||:.....||.|.|.|.|.::   .|.|||.....:.:    || :|..
Human   176 FIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPS 240

  Fly  2778 MLARYEKDQLSPAEIVNL-PSHVTFEEYVNNEIICEVLGNPAPRVTWARVDGHADAQSTRTYDNR 2841
            :.||:      |||...| ...||.|        |...|||.||:.|.:|||....|.| |.:..
Human   241 IKARF------PAETYALVGQQVTLE--------CFAFGNPVPRIKWRKVDGSLSPQWT-TAEPT 290

  Fly  2842 LIFDSPRKSDEGRYRCQAENDQNRDEKYVIVYVQSNPPQPPPQQDRLYITPEEINGLAGESFQLN 2906
            |...|....|||.|.|:|||.:.||.....:.||:.|.......|    |..:|    |.:.:..
Human   291 LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISD----TEADI----GSNLRWG 347

  Fly  2907 CQFTSVASLRYDWSHNGRSLSSSPARNVEIRGNTLEVRDASESDSGVYTCVAYDVRTRRNFTESA 2971
            |...........|..||..|:|.  ..||:....|.....|..|||:|.|||    ..::.|..|
Human   348 CAAAGKPRPTVRWLRNGEPLASQ--NRVEVLAGDLRFSKLSLEDSGMYQCVA----ENKHGTIYA 406

  Fly  2972 RVNIDRREEQP-FGNKPIIESLEQNILIIQGEDYSITCEASGSPYPSIKWAKVHDFMPENVHIS- 3034
            ...:..:...| |...|:    .:.|...:|.:..|.|:...:|...:.|:|..:.:..:..:: 
Human   407 SAELAVQALAPDFRLNPV----RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTV 467

  Fly  3035 --GNVLTIYGARFENRGVYSCVAENDHGSDLSSTSIDIEPRERPSVKIVSAPLQT-FSVGAPASL 3096
              ...|.|......:.|.|:|.|||..|...|:..:.:    |.:.||..||... .::|...:|
Human   468 TPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV----RDATKITLAPSSADINLGDNLTL 528

  Fly  3097 YCTVEGIP--DPTVEWVRVDGQPLS--------PRHKI-QSPGYMVIDDIQLEDSGDYECRAKNI 3150
            .|.....|  |.|..|. :|..|:.        .|..: ::.|.:.|.:.||...|.|.|.|:.:
Human   529 QCHASHDPTMDLTFTWT-LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTV 592

  Fly  3151 VGEATGVATITVQEP--------------TLVQII------------------------------ 3171
            |..|:..||:.|:.|              |.:|:.                              
Human   593 VDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVR 657

  Fly  3172 --PDNRDLRLTEGDELSLT-------------CVGSGVPN------------PEVE--------- 3200
              |.|.:........|.||             .:|:|.|:            |.|.         
Human   658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGG 722

  Fly  3201 -----WVNEMALKRDLYSPPSNTAIL----------KIYRVTKADAGIYTCHGKNEAGSDEAHVR 3250
                 .||...:.|:..:......:|          :..||..|||..:....::........|:
Human   723 APGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNESVRPYTPFEVK 787

  Fly  3251 VEVQERRGD----IGGVDDDSDRDP------------------INYNPPQQQNPGIHQPGSNQLL 3293
            :....||||    :..:...::.:|                  :.:.|.||...||       ||
Human   788 IRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-------LL 845

  Fly  3294 ATDI-----GDNVTLTCDMFQP--LNTRWERVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNG 3351
            ..:|     ||. ....|..:.  |:|. .||.|.. |...|.:..|            .|...|
Human   846 GYEIRYWKAGDK-EAAADRVRTAGLDTS-ARVSGLH-PNTKYHVTVR------------AYNRAG 895

  Fly  3352 IG---RDGNVKTYFVKELVLMPLPR----------------IRFYPNIPLTVEAG--------QN 3389
            .|   ...|..|       :.|.||                |::.|.:|...|:.        ||
Human   896 TGPASPSANATT-------MKPPPRRPPGNISWTFSSSSLSIKWDPVVPFRNESAVTGYKMLYQN 953

  Fly  3390 LDVHCQ----------VENVRPEDVHWSTDNNR-----------------------PLPSSVRIV 3421
             |:|..          :|...|||:..:....|                       |||.|.|.:
Human   954 -DLHLTPTLHLTGKNWIEIPVPEDIGHALVQIRTTGPGGDGIPAEVHIVRNGGAAPPLPLSPREI 1017

  Fly  3422 GSVLRFV--------SITQAAAGEYRCSAFNQYGNRSQI-ARVAVKKPADFHQVPQSQLQRHREG 3477
            ....|::        :......|:::       ..|:|: :.:....|..|:..|::. .|.|||
Human  1018 QDPPRYLRGSFPPRPTPISTRKGKWK-------AGRNQVQSSLRTASPPPFYPAPRTS-PRAREG 1074

  Fly  3478 ENIQLQCTVTDQYGVR--AQDNVEFNWFRDDRRPLPNNARTDSQILVLTNLRPEDAGRYICNSYD 3540
            ..:|.:  ..||..:.  .|..|.....|...||||.        |.|. |...|.|.:......
Human  1075 RRVQGE--AEDQPAIANGLQSTVGVGLRRPPSRPLPG--------LQLA-LHKHDGGEHGSPPST 1128

  Fly  3541 VDRGQQLPEVSIDLQVLRAPQYPYNRFKGGVSLKDTPCMVLYICAAATPPPN---SPIYLP 3598
            ....:..|        ||....|: |..|.:.|:..|     :..:.||||.   ||..||
Human  1129 TPWHRHFP--------LRGDADPH-RLPGALILEPLP-----LRRSWTPPPTDTASPFLLP 1175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trolNP_001401049.1 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060
LDLa 616..650 CDD:238060
LDLa 704..739 CDD:238060
LDLa 813..847 CDD:238060
LDLa 852..887 CDD:238060
LDLa 902..936 CDD:238060
LDLa 956..990 CDD:238060
LDLa 997..1030 CDD:238060
LDLa 1033..1067 CDD:238060
LDLa 1072..1105 CDD:238060
LDLa 1133..1165 CDD:238060
LDLa 1182..1215 CDD:238060
LDLa 1221..1251 CDD:238060
LDLa 1252..1286 CDD:238060
LDLa 1292..1326 CDD:238060
Ig 1344..1405 CDD:472250
Ig strand B 1355..1359 CDD:409353
Ig strand C 1369..1372 CDD:409353
Ig strand E 1388..1392 CDD:409353
LDLa 1439..1473 CDD:238060
LDLa 1479..1513 CDD:238060
LDLa 1522..1556 CDD:238060
Ig_Perlecan_like 1574..1649 CDD:143220
Ig strand B 1577..1583 CDD:143220
Ig strand C 1590..1595 CDD:143220
Ig strand E 1613..1617 CDD:143220
Ig strand F 1626..1632 CDD:143220
Ig strand G 1641..1647 CDD:143220
Laminin_B 1748..1878 CDD:459652
EGF_Lam 1935..1989 CDD:238012
Laminin_B 2113..2249 CDD:459652
EGF_Lam <2250..2276 CDD:238012
EGF_Lam 2284..2333 CDD:238012
Laminin_EGF <2369..2399 CDD:395007
Laminin_B 2465..2599 CDD:459652
Ig_3 2688..2756 CDD:464046 23/106 (22%)
Ig_3 2791..2861 CDD:464046 26/70 (37%)
Ig_3 2890..2958 CDD:464046 18/67 (27%)
Ig 2987..3071 CDD:472250 18/86 (21%)
Ig strand B 3004..3008 CDD:409353 1/3 (33%)
Ig strand C 3017..3021 CDD:409353 0/3 (0%)
Ig strand E 3036..3040 CDD:409353 1/3 (33%)
Ig strand F 3050..3055 CDD:409353 2/4 (50%)
Ig strand G 3063..3066 CDD:409353 1/2 (50%)
I-set 3089..3162 CDD:400151 22/83 (27%)
Ig strand B 3094..3098 CDD:409353 1/3 (33%)
Ig strand C 3107..3111 CDD:409353 1/3 (33%)
Ig strand E 3128..3132 CDD:409353 1/3 (33%)
Ig strand F 3142..3147 CDD:409353 2/4 (50%)
Ig strand G 3155..3158 CDD:409353 0/2 (0%)
Ig 3165..3253 CDD:472250 23/182 (13%)
Ig strand B 3185..3189 CDD:409353 3/16 (19%)
Ig strand C 3198..3202 CDD:409353 1/17 (6%)
Ig strand E 3219..3223 CDD:409353 1/13 (8%)
Ig strand F 3233..3238 CDD:409353 0/4 (0%)
Ig strand G 3246..3249 CDD:409353 0/2 (0%)
Ig 3298..3355 CDD:472250 14/61 (23%)
Ig strand B 3301..3305 CDD:409353 0/3 (0%)
Ig strand C 3313..3316 CDD:409353 1/2 (50%)
Ig strand E 3333..3336 CDD:409353 1/2 (50%)
IG_like 3381..3457 CDD:214653 20/125 (16%)
Ig strand B 3390..3394 CDD:409353 1/3 (33%)
Ig strand C 3403..3407 CDD:409353 1/3 (33%)
Ig strand F 3437..3442 CDD:409353 0/4 (0%)
IG_like 3475..>3536 CDD:214653 18/62 (29%)
Ig strand B 3480..3484 CDD:409353 1/3 (33%)
Ig strand C 3491..3503 CDD:409353 2/13 (15%)
Ig strand E 3519..3523 CDD:409353 1/3 (33%)
Ig 3613..3675 CDD:472250
Ig strand B 3625..3629 CDD:409353
Ig strand C 3637..3642 CDD:409353
Ig strand E 3658..3662 CDD:409353
IG_like 3706..3772 CDD:214653
Ig strand B 3714..3718 CDD:409353
Ig strand C 3727..3731 CDD:409353
Ig strand E 3746..3750 CDD:409353
Ig strand F 3760..3765 CDD:409353
Ig strand G 3774..3777 CDD:409353
LamG 3794..3939 CDD:238058
EGF 3962..3994 CDD:394967
LamG 4042..4195 CDD:238058
EGF_CA 4254..4286 CDD:238011
LamG 4295..4448 CDD:238058
CNTN2XP_047285058.1 IgI_1_Contactin-2 35..131 CDD:409437 17/73 (23%)
Ig strand A 38..42 CDD:409437
Ig strand A' 45..50 CDD:409437
Ig strand B 56..64 CDD:409437 2/2 (100%)
Ig strand C 69..75 CDD:409437 2/5 (40%)
Ig strand C' 77..80 CDD:409437 0/2 (0%)
Ig strand D 87..91 CDD:409437 1/3 (33%)
Ig strand E 93..99 CDD:409437 1/5 (20%)
Ig strand F 106..115 CDD:409437 2/10 (20%)
Ig strand G 118..131 CDD:409437 2/12 (17%)
Ig2_Contactin-2-like 139..228 CDD:409392 24/99 (24%)
Ig strand A 141..146 CDD:409392 2/4 (50%)
Ig strand B 150..156 CDD:409392 1/5 (20%)
Ig strand C 164..170 CDD:409392 2/10 (20%)
Ig strand C' 175..177 CDD:409392 0/1 (0%)
Ig strand D 182..187 CDD:409392 0/4 (0%)
Ig strand E 190..194 CDD:409392 3/3 (100%)
Ig strand F 204..212 CDD:409392 3/7 (43%)
Ig strand G 216..228 CDD:409392 4/11 (36%)
Ig 239..324 CDD:472250 34/99 (34%)
Ig strand B 257..261 CDD:409353 3/11 (27%)
Ig strand C 270..274 CDD:409353 1/3 (33%)
Ig strand E 289..293 CDD:409353 1/3 (33%)
Ig strand F 303..308 CDD:409353 2/4 (50%)
Ig strand G 316..319 CDD:409353 0/2 (0%)
Ig4_Contactin-2-like 328..412 CDD:143205 23/97 (24%)
Ig strand A 328..331 CDD:143205 0/2 (0%)
Ig strand A' 335..339 CDD:143205 2/7 (29%)
Ig strand B 343..351 CDD:143205 1/7 (14%)
Ig strand C 357..362 CDD:143205 1/4 (25%)
Ig strand C' 364..367 CDD:143205 1/2 (50%)
Ig strand D 372..376 CDD:143205 2/3 (67%)
Ig strand E 378..383 CDD:143205 1/4 (25%)
Ig strand F 392..399 CDD:143205 4/10 (40%)
Ig strand G 403..412 CDD:143205 2/8 (25%)
Ig5_Contactin 417..505 CDD:409358 20/91 (22%)
Ig strand A 417..422 CDD:409358 2/4 (50%)
Ig strand A' 425..430 CDD:409358 1/4 (25%)
Ig strand B 434..441 CDD:409358 1/6 (17%)
Ig strand C 449..453 CDD:409358 0/3 (0%)
Ig strand D 467..470 CDD:409358 0/2 (0%)
Ig strand E 471..476 CDD:409358 1/4 (25%)
Ig strand F 484..492 CDD:409358 4/7 (57%)
Ig strand G 498..505 CDD:409358 1/6 (17%)
Ig6_Contactin-2 507..603 CDD:409440 26/96 (27%)
Ig strand A 507..513 CDD:409440 2/5 (40%)
Ig strand A' 516..521 CDD:409440 0/4 (0%)
Ig strand B 524..532 CDD:409440 2/7 (29%)
Ig strand C 541..545 CDD:409440 1/3 (33%)
Ig strand D 566..569 CDD:409440 0/2 (0%)
Ig strand E 570..574 CDD:409440 1/3 (33%)
Ig strand F 583..590 CDD:409440 3/6 (50%)
Ig strand G 597..601 CDD:409440 0/3 (0%)
FN3 618..705 CDD:238020 10/86 (12%)
FN3 726..800 CDD:238020 14/73 (19%)
FN3 815..907 CDD:238020 23/113 (20%)
PHA03247 <989..1184 CDD:223021 47/220 (21%)
Blue background indicates that the domain is not in the aligned region.

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