Sequence 1: | NP_001027038.3 | Gene: | trol / 45320 | FlyBaseID: | FBgn0284408 | Length: | 4479 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
Alignment Length: | 904 | Identity: | 222/904 - (24%) |
---|---|---|---|
Similarity: | 324/904 - (35%) | Gaps: | 302/904 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 1849 STAREVDLINIALDSAGTADKGLGSASLVEK------C-QCPPGYVGDSCESCASG-YVRQPGGP 1905
Fly 1906 WLGHCVPFIPDSCPSGTYGDPRRGVPCKECPCPLTGSNNFASGCQQSPDGDVVCRCNEGYTGRRC 1970
Fly 1971 EQCAAG-YQGNP-------LAAGGICRRIPDTSCNVDGTYSVHSNGTCQCKDSVIGEQCDTCKSK 2027
Fly 2028 SFHLNSFTYTGCIECFCSGVGLDCDSSTWYR-DQVTSTFGRSR------------VDHGFVLVTN 2079
Fly 2080 YMQPTPDTVPVSMAAEPNALSFIGSADQSGNTLYWSLPAAFLGNKLSSYGGKLTYTLSYSPLPNG 2144
Fly 2145 IMSRNSAPDVVIK-SGEDLRLIHYRKSQVVPSV-ANTYSVEIKES---AWQ-----RGDEVVANR 2199
Fly 2200 EHVLMALSDITAIYIKATYTTSTKEASLRQVTLDVATPTNLGTPRAVEVEQCRCPEGYLGLSCEQ 2264
Fly 2265 CAPGYARDP-EGGIYLGLCRPCECNGHSKYCNSDTGDCEECSDNTEGPSCERCAAGYVGDATRGT 2328
Fly 2329 IYDCQ----PDEGYPIPSPPAPGNQTLECT--------AYCQ--IEGIY---------------- 2363
Fly 2364 DCRGN--------------ECL-CKRNVIGDQCDQCRPGTYGLSAQNQDG-CKECYCSGLASQCR 2412
Fly 2413 SAALYRQLIPVDFILNAPLITDESGAVQDTENLIPDISRNMYTYTHTSYLPKYWSLRGSVLGNQL 2477
Fly 2478 FSYGGRLSYSLIVESYGNYERGHDIVLIGNGLKLIWSRPDGNENQEEYNVRLHEDEQWTRQDRES 2542
Fly 2543 ARPASRSDFMTVLSDLQHILIRATPRVPTQSTSIGNVILESAVTTRTPGATHASDIELCQCPSGY 2607
Fly 2608 VGTSCESCAPLHYRDASGSCSLCPCDVSNTESCDLVSGGYVECRCKARWKG---DRCRE 2663 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trol | NP_001027038.3 | LDLa | 447..480 | CDD:238060 | |
LDLa | 532..564 | CDD:238060 | |||
LDLa | 571..606 | CDD:238060 | |||
LDLa | 616..650 | CDD:238060 | |||
LDLa | 704..739 | CDD:238060 | |||
LDLa | 813..847 | CDD:238060 | |||
LDLa | 852..887 | CDD:238060 | |||
LDLa | 902..936 | CDD:238060 | |||
LDLa | 956..990 | CDD:238060 | |||
LDLa | 997..1030 | CDD:238060 | |||
LDLa | 1033..1067 | CDD:238060 | |||
LDLa | 1072..1105 | CDD:238060 | |||
LDLa | 1133..1165 | CDD:238060 | |||
LDLa | 1182..1215 | CDD:238060 | |||
LDLa | 1221..1251 | CDD:238060 | |||
LDLa | 1252..1286 | CDD:238060 | |||
LDLa | 1292..1326 | CDD:238060 | |||
IG | 1344..1421 | CDD:214652 | |||
Ig | 1344..1405 | CDD:299845 | |||
LDLa | 1439..1473 | CDD:238060 | |||
LDLa | 1479..1513 | CDD:238060 | |||
LDLa | 1522..1556 | CDD:238060 | |||
IG_like | 1566..1649 | CDD:214653 | |||
Ig_Perlecan_D2_like | 1574..1649 | CDD:143220 | |||
Laminin_B | 1748..1864 | CDD:278481 | 5/14 (36%) | ||
EGF_Lam | 1935..1989 | CDD:238012 | 18/61 (30%) | ||
Laminin_B | 2113..2238 | CDD:278481 | 37/134 (28%) | ||
EGF_Lam | <2250..2276 | CDD:238012 | 17/26 (65%) | ||
EGF_Lam | 2284..2333 | CDD:238012 | 23/48 (48%) | ||
Laminin_EGF | <2369..2399 | CDD:278482 | 13/31 (42%) | ||
Laminin_B | 2465..2587 | CDD:278481 | 13/121 (11%) | ||
I-set | 2686..2772 | CDD:254352 | |||
Ig_2 | 2689..2771 | CDD:290606 | |||
Ig | 2779..2865 | CDD:299845 | |||
IG_like | 2798..2864 | CDD:214653 | |||
Ig | 2882..2965 | CDD:299845 | |||
IG_like | 2882..2950 | CDD:214653 | |||
Ig | 2977..3061 | CDD:299845 | |||
IG_like | 2984..3058 | CDD:214653 | |||
IG_like | 3074..3152 | CDD:214653 | |||
Ig | 3086..3153 | CDD:299845 | |||
I-set | 3155..3243 | CDD:254352 | |||
IGc2 | 3171..3233 | CDD:197706 | |||
IG | 3371..3447 | CDD:214652 | |||
IGc2 | 3377..3437 | CDD:197706 | |||
Ig | 3456..3534 | CDD:299845 | |||
IG | 3465..>3526 | CDD:214652 | |||
Ig | 3603..3665 | CDD:299845 | |||
IG | 3610..3683 | CDD:214652 | |||
IG | 3696..3762 | CDD:214652 | |||
Ig | 3704..3771 | CDD:299845 | |||
LamG | 3784..3929 | CDD:238058 | |||
EGF | 3952..3984 | CDD:278437 | |||
LamG | 4032..4185 | CDD:238058 | |||
Laminin_G_2 | 4315..4444 | CDD:280389 | |||
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | |
EGF_Lam | 298..347 | CDD:238012 | |||
Laminin_EGF | 359..414 | CDD:278482 | 17/81 (21%) | ||
EGF_Lam | 414..458 | CDD:214543 | 16/49 (33%) | ||
Laminin_EGF | 461..511 | CDD:278482 | 15/58 (26%) | ||
LamB | 572..697 | CDD:214597 | 37/138 (27%) | ||
TNFRSF | <721..848 | CDD:304602 | 42/132 (32%) | ||
CRD2 | 724..771 | CDD:276900 | 23/48 (48%) | ||
EGF_Lam | 743..791 | CDD:238012 | 23/48 (48%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 16/49 (33%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 13/106 (12%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 15/117 (13%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 12/37 (32%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | |||
Tar | 1139..1521 | CDD:223910 | |||
BAR | 1308..1469 | CDD:299863 | |||
vATP-synt_E | 1474..>1629 | CDD:304907 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45445134 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |